Gene Dtox_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2241 
Symbol 
ID8429224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2412486 
End bp2413523 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content38% 
IMG OID645034548 
Productintegrase family protein 
Protein accessionYP_003191678 
Protein GI258515456 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.640527 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000757999 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAATA AAGGACTACA GACCGGAACA CTGTTTTTTT CCATGACATT GGAGTTTCTT 
GAAACATATC TTCCACGCCA ATTAGGAAGA AGCTCTAAAA CTATTAAATC ATACAAAGAT
TCTCTTACAG TTTTCAGGCG TTATCTGTAT GATGAGTGCC ACATATCGGT TGCTGCTTTT
AAATTTGCCG ACTGTAATCA GAAATGTATT CAGGAATTTA TCATATATCT AAAGGATAAT
AACAATAGCC CTGGAACCTG CAATCAAAGG CTTACCGCAT TAAAGTCCTA TCTATGGTTT
GCTGCCGATA GAGATATTGC AGTCCAGTCA GTCGCATTAA GTATTTCCAA AATACCACAG
TGTAAGATTC CAAAAAAGGA AAAAGAAACA TTAACAGAAG AAGCTCTTGC TGCCATCCTG
CAGCAACCAC CAAATACGAA AATGGGATTA CGTGACCGGG TTATTATGAT ACTTCTTTAT
GATTCCGCAG TAAGATTGGA TGAGTTGTTA TGCCTTACAC TGAAGGACCT TTCCCTACGA
ACCGATAATC CTTACATAAG AATTTCAGGA AAGGGGAATA AAGAACGCAT CGTTGCTATA
ACTCCTAAAA CAGCAGAGCA TCTAAAACAA TATTTGTCGG TGTATCATAA GAATGATTTA
AACATGGATC AATATCTATT CATTACCAGG ATTAAAGGAG TTACAGACAG GATGTCTCCC
GGAAATGTAG AACGCTTTAT TAAGCAATAT GCAAATAGCG CAAGAGAGAA ATGTCTTCAG
ATACCATTAA AAGTATATCC GCATATGTTT AGGCGGACAA GGGCAACCGA CCTCTATCAA
AACGGCGTGG AACTTGAGCT TGTATCAAGA ATCCTCGGGC ATTCATCAAC TGAAACAACA
AAAGTCTATG CAAAACCGTC GATAGAAATG CTTAGAAAAG CAATTGAATC CGTAGAAATA
CCAGAGCAGA CAAACGAGGA ACCATTATGG ACATCATGTA ATGAAGAAGA AATGGCCAAA
CTGTGTGGCT TGAGATAA
 
Protein sequence
MKNKGLQTGT LFFSMTLEFL ETYLPRQLGR SSKTIKSYKD SLTVFRRYLY DECHISVAAF 
KFADCNQKCI QEFIIYLKDN NNSPGTCNQR LTALKSYLWF AADRDIAVQS VALSISKIPQ
CKIPKKEKET LTEEALAAIL QQPPNTKMGL RDRVIMILLY DSAVRLDELL CLTLKDLSLR
TDNPYIRISG KGNKERIVAI TPKTAEHLKQ YLSVYHKNDL NMDQYLFITR IKGVTDRMSP
GNVERFIKQY ANSAREKCLQ IPLKVYPHMF RRTRATDLYQ NGVELELVSR ILGHSSTETT
KVYAKPSIEM LRKAIESVEI PEQTNEEPLW TSCNEEEMAK LCGLR