Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2241 |
Symbol | |
ID | 8429224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 2412486 |
End bp | 2413523 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 645034548 |
Product | integrase family protein |
Protein accession | YP_003191678 |
Protein GI | 258515456 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.640527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000757999 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAATA AAGGACTACA GACCGGAACA CTGTTTTTTT CCATGACATT GGAGTTTCTT GAAACATATC TTCCACGCCA ATTAGGAAGA AGCTCTAAAA CTATTAAATC ATACAAAGAT TCTCTTACAG TTTTCAGGCG TTATCTGTAT GATGAGTGCC ACATATCGGT TGCTGCTTTT AAATTTGCCG ACTGTAATCA GAAATGTATT CAGGAATTTA TCATATATCT AAAGGATAAT AACAATAGCC CTGGAACCTG CAATCAAAGG CTTACCGCAT TAAAGTCCTA TCTATGGTTT GCTGCCGATA GAGATATTGC AGTCCAGTCA GTCGCATTAA GTATTTCCAA AATACCACAG TGTAAGATTC CAAAAAAGGA AAAAGAAACA TTAACAGAAG AAGCTCTTGC TGCCATCCTG CAGCAACCAC CAAATACGAA AATGGGATTA CGTGACCGGG TTATTATGAT ACTTCTTTAT GATTCCGCAG TAAGATTGGA TGAGTTGTTA TGCCTTACAC TGAAGGACCT TTCCCTACGA ACCGATAATC CTTACATAAG AATTTCAGGA AAGGGGAATA AAGAACGCAT CGTTGCTATA ACTCCTAAAA CAGCAGAGCA TCTAAAACAA TATTTGTCGG TGTATCATAA GAATGATTTA AACATGGATC AATATCTATT CATTACCAGG ATTAAAGGAG TTACAGACAG GATGTCTCCC GGAAATGTAG AACGCTTTAT TAAGCAATAT GCAAATAGCG CAAGAGAGAA ATGTCTTCAG ATACCATTAA AAGTATATCC GCATATGTTT AGGCGGACAA GGGCAACCGA CCTCTATCAA AACGGCGTGG AACTTGAGCT TGTATCAAGA ATCCTCGGGC ATTCATCAAC TGAAACAACA AAAGTCTATG CAAAACCGTC GATAGAAATG CTTAGAAAAG CAATTGAATC CGTAGAAATA CCAGAGCAGA CAAACGAGGA ACCATTATGG ACATCATGTA ATGAAGAAGA AATGGCCAAA CTGTGTGGCT TGAGATAA
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Protein sequence | MKNKGLQTGT LFFSMTLEFL ETYLPRQLGR SSKTIKSYKD SLTVFRRYLY DECHISVAAF KFADCNQKCI QEFIIYLKDN NNSPGTCNQR LTALKSYLWF AADRDIAVQS VALSISKIPQ CKIPKKEKET LTEEALAAIL QQPPNTKMGL RDRVIMILLY DSAVRLDELL CLTLKDLSLR TDNPYIRISG KGNKERIVAI TPKTAEHLKQ YLSVYHKNDL NMDQYLFITR IKGVTDRMSP GNVERFIKQY ANSAREKCLQ IPLKVYPHMF RRTRATDLYQ NGVELELVSR ILGHSSTETT KVYAKPSIEM LRKAIESVEI PEQTNEEPLW TSCNEEEMAK LCGLR
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