Gene Dtox_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2214 
Symbol 
ID8429197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2382791 
End bp2384044 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content41% 
IMG OID645034525 
Productintegrase domain protein SAM domain protein 
Protein accessionYP_003191655 
Protein GI258515433 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000184093 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCTCGAT TAACTGATTT TATAAATCTT TCGAATGAAT TAAAACGGGT TCCAATCTCG 
GAACTGATTG TGAAGGCAAA GTCGCTGGTA AAAGCAAAGA GATACTCGCA GAGTACAATA
TGGCACTACA ATGAAAGGTT CAATGATCTC CAACATAGCT CGGCCCTATT TAACACAGAA
AAACTCTCGG AAAAATTTAT TGCTCAGTAT ATTGAAGAAG GAATGCAAAA GAGTCCTAAA
CTTGCTCGTA GTAGTGTCCA AAGAAAAGCG CTTCTTAACT TGATCGCGGC AGCCGTCAAC
ACTACTCCTG TTTTCACTAA CGAAAAAGAT GCTGATAAAA TCCAAATCAA GTCTCTTCGA
GAAAATCTAA ATACCTATAA TCAGTATCTC AGAGAACAAG AAAAAAGAAA GGAAACGATA
AAATCATATC TTCAGGTAGC GACAAAATTT CTACTTTATC TGGATAAAAA TAAAAAGAGC
AATTTCTCTA AAGTCACGGC AATTGATATC CGGGAATTCA TTACTGATTT AGGCGCCAAA
TGGTCGCCAA GAAGCATGCG GATTGTACCG TCACAACTCA AAACCTACCT GAAATTTGCG
GGATTCCCTG TGAACGCCAT ACTTTTCTCG AGCTTTCGCG CCCCCCGCAA GAGCAAACCA
GTCCGTGCTA TGAGTTTTGA AAATGTAGAA GCTCTTTGGA AATATATTGA GGGCGATGAT
GGGGATTTAA GATCAAAAGC GATAGTGACA ATACTGCTTG CGACAGGCAT GAGGCCGGTT
GACATTACCG AACTCAAACT TGATGATATT AACTGGAACA ATGACAACAT CGGCTTTATT
CAAAGCAAAA CAGGCGAAGG CATGAATATT GAACTCTTTC CTGTGATGGG TTCAGCGATT
ATCAGATATA TGACCGAAGA ACGCCCTAAA GGAACAGGAG CGAAATTTAT TTTTCTTACA
AAAAAGGCTC CATACCGCGG ACTCACTCCA TCCGTTTGTA ATTGCATTTT AAAAGTTGCC
TTAGAAAAAA TCGGCGTCAC TTTTGTCGCG GACGGACTTC ATTGTCCGAG AGCAGTAAGG
CGCAGTTTAG TATCACGAAT GATTGCAAAA GGTGTCCCTG TACAAAATGC CGCTGCGGCT
ATCGGGCATG TCGATGAAAA ATCTGTTGAT TTGTATACTG AACTGGATGT GAAAAAGATG
AGATCTATCT GTCTGCCTAT ACCGAATCCT ATGAAAGAAT GGTTGTCAAC CTAA
 
Protein sequence
MPRLTDFINL SNELKRVPIS ELIVKAKSLV KAKRYSQSTI WHYNERFNDL QHSSALFNTE 
KLSEKFIAQY IEEGMQKSPK LARSSVQRKA LLNLIAAAVN TTPVFTNEKD ADKIQIKSLR
ENLNTYNQYL REQEKRKETI KSYLQVATKF LLYLDKNKKS NFSKVTAIDI REFITDLGAK
WSPRSMRIVP SQLKTYLKFA GFPVNAILFS SFRAPRKSKP VRAMSFENVE ALWKYIEGDD
GDLRSKAIVT ILLATGMRPV DITELKLDDI NWNNDNIGFI QSKTGEGMNI ELFPVMGSAI
IRYMTEERPK GTGAKFIFLT KKAPYRGLTP SVCNCILKVA LEKIGVTFVA DGLHCPRAVR
RSLVSRMIAK GVPVQNAAAA IGHVDEKSVD LYTELDVKKM RSICLPIPNP MKEWLST