Gene Dtox_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2180 
Symbol 
ID8429163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2347627 
End bp2350395 
Gene Length2769 bp 
Protein Length922 aa 
Translation table11 
GC content38% 
IMG OID645034494 
ProductGAF sensor hybrid histidine kinase 
Protein accessionYP_003191624 
Protein GI258515402 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.238731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0123004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTA AAACTAAGCT ATACATGGGT TTTGGCAGCC TTTTGTTGTT GATGATGATC 
CCTTTGGGTA TTGGTTTTAG TATTATTAGC CAATTAAAAA ACTCCATGGA TGAAGTTATG
ATAGTCCGGT ATGAAAAGGT TCGCTTAGCG GATTTGGTTA ATGATGAGAC TTACAAGATT
AGCCGTTATC TCAGAGATCT CATATTGTTA GATAATGATA AAGACAGCGT GCAAAAAAGA
ATTGAGCAAA TAGAAAACTC CCGGGAAAAC AGTTTAACTG CTCTGAATAC CTTGGATAAA
ATTGTTATTA GGCCGCAGGC TAAAAAATTA ACATCTCAAA TCAAGTTGAT GAGTATTTCT
TATATTGATT TTCAGAAAGA GATAGAAGCA GATGTTAAGG ACGGACGAAG AAATGATGCC
AGGCATCTTT TATTAGCCAG TGATCAAAAG TTCAGAGATC AATTGTATGG GAGCAATGGG
AGTATTAAGA AGCTTAAAGA ACTTGAAGAG CAGACCATGA GTGATTTGGT AGATCAGGCG
AGGCATAGTT ACCAGCAAGC CATACGAATA TATTCTATCT TTATAATCCT GGGTTTGCTG
TTCGGTATGG GTATTATAAT CTTATCAATT CGCAGTATAA CCAGTAATAT TAATAAAGTA
ACTGTTGCCA TAAACAAAGT TGCCTCCTTA GGTCCACGAG ATGAGCTTCC CCGTGTGGAA
ATATTCACCC AAGATGCCAT AGGAGAAATT GCAAAAGCAT TCAATGAAAT GGCCAGCGCC
CTGGAGGAGC AGGTTAAAAA GCAAAAAATG TATAATAAAA CGTTGCAGGA ACAAAACTGG
TTGAAATCAA AAATTGCCAA AATTTCCACA ATGTATTCAG GAGTCAAGGA TTTACAAACT
TTTGCTAGCT TATTGATAAA TAAATTAACT CCGGTAGTTG GTGGAAATTA CGGTGCTTTT
TATATGTTAG AAAGCCAAGA AGAGCGATAC TATCTCTCCC AAATAGCTGT CTATGCCTTT
GACAAACGGG ATATAACCTG CCCTAATTTC CAACTAGGAG AGGGGCTGGT AGGACAATGT
GCATTAGAAA ACAGAATCAT AACTTTAACC CAAATTCCCG ATAATTATAT TAGGATTAAC
TCCGGGCTAG GCTCAGCACC GCCTAAAAAT ATTATAATCT ATCCGGTGGA ATTTGAAGGG
CAAGTTTTGG CTGTATTGGA GCTGGCAACT TTGGAGGAAT TTAACCCTAT ACAGCAGGAA
CTGCTTGAGC AGGTGTTAAG TAATGTCGGT ATTACTATTG ATAGAATAGT TAACTACATG
CAGGTGGAAA AACTACTCAA GGAATCCCAG GTATTAACTG AAGAGTTGCA AACCCAAGCC
GAGGAATTGC AAATCCAGCA GGAGGAATTA AAAACCTTTA ATGAAAAACT GGATGAACAG
TATAAGTTTT CTCACCAACG GGCGGTTGAA TTAGAAAATA TCAAAGTTGT TCTAGAGGAA
AAAGCAAGTC AATTGGAGCT TAATTCCCGG TATAAGTCAG AGTTTCTCTC TAATATGTCT
CACGAGTTAC GAACACCCTT GAACAGTCTT TTAATTCTTG CTCAAATGCT GGCTGAAAAT
GATAATAGTA ACTTAACCCA TAAACAAGTT GAGTATGCGG AGACAATTTT ATCTTCCGGC
AGGGATTTAT TAAGTCTAAT TAATGATATT TTAGACTTAT CCAAAGCAGA AGCGGGTAAA
ATGGATGTTT GCCCCAGGGT AGTGAAGTTA AAGGCTATAC AAGAGTTTTT AAAACGACAA
TATCTACCTG TTGCTATCCA AAAAGGTATT ACTTTTACTA TACAGCTTAA AAATGGTCTG
CCGGAGACTT TTATTACCGA TGAACAAAGA TTGCTGCAAA TACTTAAGAA TTTATTATCT
AACGCTTTTA AATTTACGGA GCAGGGAAGT GTACTTCTTA GTATACGAAA GGCAGAAAAA
AGGTTCACAG ATAAACAGAT ACTCTTCGAT AATGCTTCGA CAATGTTAAG TTTTTCTGTT
TCTGATACTG GTGTTGGAAT TCCCCGGGAC AAGCATATTA TGATTTTTGA AGAATTCCGG
CAGGCAGACG GGACAACCAG TCGTAAATAC GGCGGCTCAG GCTTAGGTTT GTCCATCTCC
AATAAAATTG CCATGTTGCT GGGTGGTTTT ATTGAATTAG AAAGTGAAGA AGGTAAAGGC
AGTACTTTCA CACTTTATTT ACCCTATAGT TTAGACAGTA TTACGGCTGA AGCTGCATTG
GGCGTTGAAG CAGCGGCAGA GCCGGATGAG CCGGTTATTG ATGAACCTGG TGAAGATAAT
GCCGGTGAAG ATAATGCCGG TGCAGCAATG GCAATAGATC ATCATCGAGA CTGGTTGGCG
GGCCGAAAAA TATTAATAGT AGATGATGAT TTGCGAAATG TATTTTCTCT AACAGTAGTT
CTTGAAAAAC ATGGGGTGAA GGTATTATTT GCAGAAAACG GTAAAGAAGG TATTAATGCT
TTAAGGGAAA ACCCTGATAT TGACCTTGTA CTAATGGATA TTATGATGCC GGAAATGGAC
GGATATGAAG CCATGCAAAC AATCCGACAA ATACATGAAT ATGAAACATT ACCGGTAATA
GCTCTGACTG CCAAGGCCAT GAAAAATGAC CGAGAAAAGT GTATTGACGC GGGAGCCTCT
GATTATATAA GTAAGCCGGT CAATGTAGAG CAGCTGCTTT CATTAATACA GGTATGGTTA
TATAAATAG
 
Protein sequence
MDFKTKLYMG FGSLLLLMMI PLGIGFSIIS QLKNSMDEVM IVRYEKVRLA DLVNDETYKI 
SRYLRDLILL DNDKDSVQKR IEQIENSREN SLTALNTLDK IVIRPQAKKL TSQIKLMSIS
YIDFQKEIEA DVKDGRRNDA RHLLLASDQK FRDQLYGSNG SIKKLKELEE QTMSDLVDQA
RHSYQQAIRI YSIFIILGLL FGMGIIILSI RSITSNINKV TVAINKVASL GPRDELPRVE
IFTQDAIGEI AKAFNEMASA LEEQVKKQKM YNKTLQEQNW LKSKIAKIST MYSGVKDLQT
FASLLINKLT PVVGGNYGAF YMLESQEERY YLSQIAVYAF DKRDITCPNF QLGEGLVGQC
ALENRIITLT QIPDNYIRIN SGLGSAPPKN IIIYPVEFEG QVLAVLELAT LEEFNPIQQE
LLEQVLSNVG ITIDRIVNYM QVEKLLKESQ VLTEELQTQA EELQIQQEEL KTFNEKLDEQ
YKFSHQRAVE LENIKVVLEE KASQLELNSR YKSEFLSNMS HELRTPLNSL LILAQMLAEN
DNSNLTHKQV EYAETILSSG RDLLSLINDI LDLSKAEAGK MDVCPRVVKL KAIQEFLKRQ
YLPVAIQKGI TFTIQLKNGL PETFITDEQR LLQILKNLLS NAFKFTEQGS VLLSIRKAEK
RFTDKQILFD NASTMLSFSV SDTGVGIPRD KHIMIFEEFR QADGTTSRKY GGSGLGLSIS
NKIAMLLGGF IELESEEGKG STFTLYLPYS LDSITAEAAL GVEAAAEPDE PVIDEPGEDN
AGEDNAGAAM AIDHHRDWLA GRKILIVDDD LRNVFSLTVV LEKHGVKVLF AENGKEGINA
LRENPDIDLV LMDIMMPEMD GYEAMQTIRQ IHEYETLPVI ALTAKAMKND REKCIDAGAS
DYISKPVNVE QLLSLIQVWL YK