Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2180 |
Symbol | |
ID | 8429163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 2347627 |
End bp | 2350395 |
Gene Length | 2769 bp |
Protein Length | 922 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 645034494 |
Product | GAF sensor hybrid histidine kinase |
Protein accession | YP_003191624 |
Protein GI | 258515402 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.238731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0123004 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTA AAACTAAGCT ATACATGGGT TTTGGCAGCC TTTTGTTGTT GATGATGATC CCTTTGGGTA TTGGTTTTAG TATTATTAGC CAATTAAAAA ACTCCATGGA TGAAGTTATG ATAGTCCGGT ATGAAAAGGT TCGCTTAGCG GATTTGGTTA ATGATGAGAC TTACAAGATT AGCCGTTATC TCAGAGATCT CATATTGTTA GATAATGATA AAGACAGCGT GCAAAAAAGA ATTGAGCAAA TAGAAAACTC CCGGGAAAAC AGTTTAACTG CTCTGAATAC CTTGGATAAA ATTGTTATTA GGCCGCAGGC TAAAAAATTA ACATCTCAAA TCAAGTTGAT GAGTATTTCT TATATTGATT TTCAGAAAGA GATAGAAGCA GATGTTAAGG ACGGACGAAG AAATGATGCC AGGCATCTTT TATTAGCCAG TGATCAAAAG TTCAGAGATC AATTGTATGG GAGCAATGGG AGTATTAAGA AGCTTAAAGA ACTTGAAGAG CAGACCATGA GTGATTTGGT AGATCAGGCG AGGCATAGTT ACCAGCAAGC CATACGAATA TATTCTATCT TTATAATCCT GGGTTTGCTG TTCGGTATGG GTATTATAAT CTTATCAATT CGCAGTATAA CCAGTAATAT TAATAAAGTA ACTGTTGCCA TAAACAAAGT TGCCTCCTTA GGTCCACGAG ATGAGCTTCC CCGTGTGGAA ATATTCACCC AAGATGCCAT AGGAGAAATT GCAAAAGCAT TCAATGAAAT GGCCAGCGCC CTGGAGGAGC AGGTTAAAAA GCAAAAAATG TATAATAAAA CGTTGCAGGA ACAAAACTGG TTGAAATCAA AAATTGCCAA AATTTCCACA ATGTATTCAG GAGTCAAGGA TTTACAAACT TTTGCTAGCT TATTGATAAA TAAATTAACT CCGGTAGTTG GTGGAAATTA CGGTGCTTTT TATATGTTAG AAAGCCAAGA AGAGCGATAC TATCTCTCCC AAATAGCTGT CTATGCCTTT GACAAACGGG ATATAACCTG CCCTAATTTC CAACTAGGAG AGGGGCTGGT AGGACAATGT GCATTAGAAA ACAGAATCAT AACTTTAACC CAAATTCCCG ATAATTATAT TAGGATTAAC TCCGGGCTAG GCTCAGCACC GCCTAAAAAT ATTATAATCT ATCCGGTGGA ATTTGAAGGG CAAGTTTTGG CTGTATTGGA GCTGGCAACT TTGGAGGAAT TTAACCCTAT ACAGCAGGAA CTGCTTGAGC AGGTGTTAAG TAATGTCGGT ATTACTATTG ATAGAATAGT TAACTACATG CAGGTGGAAA AACTACTCAA GGAATCCCAG GTATTAACTG AAGAGTTGCA AACCCAAGCC GAGGAATTGC AAATCCAGCA GGAGGAATTA AAAACCTTTA ATGAAAAACT GGATGAACAG TATAAGTTTT CTCACCAACG GGCGGTTGAA TTAGAAAATA TCAAAGTTGT TCTAGAGGAA AAAGCAAGTC AATTGGAGCT TAATTCCCGG TATAAGTCAG AGTTTCTCTC TAATATGTCT CACGAGTTAC GAACACCCTT GAACAGTCTT TTAATTCTTG CTCAAATGCT GGCTGAAAAT GATAATAGTA ACTTAACCCA TAAACAAGTT GAGTATGCGG AGACAATTTT ATCTTCCGGC AGGGATTTAT TAAGTCTAAT TAATGATATT TTAGACTTAT CCAAAGCAGA AGCGGGTAAA ATGGATGTTT GCCCCAGGGT AGTGAAGTTA AAGGCTATAC AAGAGTTTTT AAAACGACAA TATCTACCTG TTGCTATCCA AAAAGGTATT ACTTTTACTA TACAGCTTAA AAATGGTCTG CCGGAGACTT TTATTACCGA TGAACAAAGA TTGCTGCAAA TACTTAAGAA TTTATTATCT AACGCTTTTA AATTTACGGA GCAGGGAAGT GTACTTCTTA GTATACGAAA GGCAGAAAAA AGGTTCACAG ATAAACAGAT ACTCTTCGAT AATGCTTCGA CAATGTTAAG TTTTTCTGTT TCTGATACTG GTGTTGGAAT TCCCCGGGAC AAGCATATTA TGATTTTTGA AGAATTCCGG CAGGCAGACG GGACAACCAG TCGTAAATAC GGCGGCTCAG GCTTAGGTTT GTCCATCTCC AATAAAATTG CCATGTTGCT GGGTGGTTTT ATTGAATTAG AAAGTGAAGA AGGTAAAGGC AGTACTTTCA CACTTTATTT ACCCTATAGT TTAGACAGTA TTACGGCTGA AGCTGCATTG GGCGTTGAAG CAGCGGCAGA GCCGGATGAG CCGGTTATTG ATGAACCTGG TGAAGATAAT GCCGGTGAAG ATAATGCCGG TGCAGCAATG GCAATAGATC ATCATCGAGA CTGGTTGGCG GGCCGAAAAA TATTAATAGT AGATGATGAT TTGCGAAATG TATTTTCTCT AACAGTAGTT CTTGAAAAAC ATGGGGTGAA GGTATTATTT GCAGAAAACG GTAAAGAAGG TATTAATGCT TTAAGGGAAA ACCCTGATAT TGACCTTGTA CTAATGGATA TTATGATGCC GGAAATGGAC GGATATGAAG CCATGCAAAC AATCCGACAA ATACATGAAT ATGAAACATT ACCGGTAATA GCTCTGACTG CCAAGGCCAT GAAAAATGAC CGAGAAAAGT GTATTGACGC GGGAGCCTCT GATTATATAA GTAAGCCGGT CAATGTAGAG CAGCTGCTTT CATTAATACA GGTATGGTTA TATAAATAG
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Protein sequence | MDFKTKLYMG FGSLLLLMMI PLGIGFSIIS QLKNSMDEVM IVRYEKVRLA DLVNDETYKI SRYLRDLILL DNDKDSVQKR IEQIENSREN SLTALNTLDK IVIRPQAKKL TSQIKLMSIS YIDFQKEIEA DVKDGRRNDA RHLLLASDQK FRDQLYGSNG SIKKLKELEE QTMSDLVDQA RHSYQQAIRI YSIFIILGLL FGMGIIILSI RSITSNINKV TVAINKVASL GPRDELPRVE IFTQDAIGEI AKAFNEMASA LEEQVKKQKM YNKTLQEQNW LKSKIAKIST MYSGVKDLQT FASLLINKLT PVVGGNYGAF YMLESQEERY YLSQIAVYAF DKRDITCPNF QLGEGLVGQC ALENRIITLT QIPDNYIRIN SGLGSAPPKN IIIYPVEFEG QVLAVLELAT LEEFNPIQQE LLEQVLSNVG ITIDRIVNYM QVEKLLKESQ VLTEELQTQA EELQIQQEEL KTFNEKLDEQ YKFSHQRAVE LENIKVVLEE KASQLELNSR YKSEFLSNMS HELRTPLNSL LILAQMLAEN DNSNLTHKQV EYAETILSSG RDLLSLINDI LDLSKAEAGK MDVCPRVVKL KAIQEFLKRQ YLPVAIQKGI TFTIQLKNGL PETFITDEQR LLQILKNLLS NAFKFTEQGS VLLSIRKAEK RFTDKQILFD NASTMLSFSV SDTGVGIPRD KHIMIFEEFR QADGTTSRKY GGSGLGLSIS NKIAMLLGGF IELESEEGKG STFTLYLPYS LDSITAEAAL GVEAAAEPDE PVIDEPGEDN AGEDNAGAAM AIDHHRDWLA GRKILIVDDD LRNVFSLTVV LEKHGVKVLF AENGKEGINA LRENPDIDLV LMDIMMPEMD GYEAMQTIRQ IHEYETLPVI ALTAKAMKND REKCIDAGAS DYISKPVNVE QLLSLIQVWL YK
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