Gene Dtox_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2089 
Symbol 
ID8429071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2268376 
End bp2269353 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content40% 
IMG OID645034410 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_003191541 
Protein GI258515319 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.321245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGTAC TTTCAGGAAT TCAACCCTCA GGTTCTCTGC ATTTGGGCAA CTATTTCGGT 
ATGATGAAAA GAATGATTGA TTATCAGGAG AATCATGAAC TATTTTGTTT TTTAGTAAAT
TACCATGCTC TGACAACTGT TTTTGACAGT GAGCTTTTAC GCCGGCAGAC CTTTGAGGCT
GTCTGCGATT TTCTTGCCCT AGGCCTTGAT CCTGAAAAAT CCGTCTTTTG GGTGCAATCT
GATGTACCCG AGGTTACCGA ATTGACCTGG ATTTTATCAA ACGTAACAGG TATGGGATTA
TTGGAGCGGT GCCATGCCTT TAAAGATAAA ACTGCCAAAG GTATACCAGC CAATCACGGA
TTATTTGCCT ATCCCGTGCT GATGGCTGCT GATATTCTGC TTTTTGGCGG TGAAAAGGTT
CCGGTTGGCA AGGATCAAAA ACAGCATTTA GAAGTAGCTA AAGACATTGC TCTTCGGTTT
AATAATGCCT ATGGAGAAAC TTTTGTTGTA CCGGAACCTG ATATTGAGGA AGATTTTGCT
GTAGTTCCGG GGACAGATGG TCAAAAAATG TCAAAATCTT ACGGAAACAA TATTGAAATA
TTTGCAGATG AAAAAACACT TAAAAAGAAG ATTATGGGGA TTATGACCGA TTCCACTCCG
GTTGATCAGC CCAAACCTGT TGAGGGTAAT ATACTTTTTG ATCTTTACAG CTTATTTTTA
GATGATAAAG ACAAAGAGAA GCTGAAAGAA AGATTCATAA CTCCCGGTCT TAAATACGGT
GATTTAAAGA AAGAAATACT GGCTGTAATC TGGGAATACT TTGCTCCCTA CAGGCAGGAA
CGGGAAAAAA TTGTCAGGGA TAAGGCATAT GTATTGAAAA CTATGCAAAA AGGTGCAAAC
AAAGCCAGGC AAGCGGCAGC TGTGTATTTA GAAAAAGCTA AACACAATGT GGGATTGGAT
TATCGTAGTC TTCTCTAG
 
Protein sequence
MRVLSGIQPS GSLHLGNYFG MMKRMIDYQE NHELFCFLVN YHALTTVFDS ELLRRQTFEA 
VCDFLALGLD PEKSVFWVQS DVPEVTELTW ILSNVTGMGL LERCHAFKDK TAKGIPANHG
LFAYPVLMAA DILLFGGEKV PVGKDQKQHL EVAKDIALRF NNAYGETFVV PEPDIEEDFA
VVPGTDGQKM SKSYGNNIEI FADEKTLKKK IMGIMTDSTP VDQPKPVEGN ILFDLYSLFL
DDKDKEKLKE RFITPGLKYG DLKKEILAVI WEYFAPYRQE REKIVRDKAY VLKTMQKGAN
KARQAAAVYL EKAKHNVGLD YRSLL