| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_2083 |
|---|
| Symbol | |
|---|
| ID | 8429065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 2260057 |
|---|
| End bp | 2261607 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 645034404 |
|---|
| Product | DSH domain protein |
|---|
| Protein accession | YP_003191535 |
|---|
| Protein GI | 258515313 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4581] Superfamily II RNA helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00750043 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTATG AAGATAATTC TGTTTATAAC AGCATTACCG AAACAGTCAA GGACCGTTTG
CCGGCACTTT TTTTCGTTTT TAGCCGGGGA AAAACAGAAC TTATTGCCGA AGAGTTAAGC
CATGATTGGG ATTTTTTAAA ACCCGCTGAA AAGAAAACAG TACAGCAAAT AGTTGCTGAT
TTCGAAAAAC AAAACCCAAC TGCTTTTGAA CGTAAAAACA GAAGACTTTT AAAAAGACTG
CTTAGCCGTG GTATCGGCTA TCATCATGCC GGGCTGTCGC CGGTCTTGAA AAATCTAGTA
GAGACGCTTT ATGAGCGAAG GCTTATTTAT GCCTTGTGCT GTACTGAGAC CTTTGCTGCC
GGGGTTAACT TTCCGGCTTG CAGTACCATC TTTGATTCCT GCCGGAAGTG GGACGGCAAA
ACCTTCCGGG GGCTTTTAAA CCGTGAATTT TTTCAAATGG CAGGCAGGGC GGGCCGCCGT
GGATTTGATG AAAAGGGTTA TGTTTTTGTT CGTATTGATG AGCAGTACCC GGAGCAAACA
ACTTTCTTTG ATGAAGATGA AGTGGAATCA GTTAACAGTC ATTTAACCAT ATCGCCAAAT
ACTGCGTTAA ACCTTTTGCA GTGGAAAACA GATGCGGAAA TTGAGCATTT TTTAACCAAT
AATTTTGCGG TTTACCAGGG TAAAAAGGAA GAAAGAGCTG TTAATATTGA TATTGAAGCC
ATTACTGCTG AGATAGAAAA TTTGGAACAG CATTTTTGCG AAGAAAGAGA TACTCGTACC
TGTGCGCTTT ATCGCAAAAA ACTAAAGAAG GAACTGTATA AGCATTACCG GAGACGCAAA
AATAACCCGG ATTACCAGTC AAAAATAGAT GAGATCAAAG AAATCCTGGA CTTACCGGCC
AGAGATTGCG CCCATTCATT ATGTTTTTCA GCAAAGAGAA ACCTGGGTAA ACTTGTTTCA
GAAAGAAAGC GCTTAAACCG GCAGCGTGAA AAGCTGGCCG GGCAGCATGA AAATTACTTT
GATAAGTTCT CCAGTGTTTG CAGTTTGCTG GAGCAGTTGG GCTATATTGA AGGACGCATT
CTGCTGCCAA GGGGGATTTT TGCTTCAAAG ATACATATCC AAGAGATACT GGTTACTGAA
CTGATCTTCT CAGGAATTAT GTCGGATGCC ACACCGGCAG AGATTGCTGC TATTATAGTT
GGTATAGATT ATGAGGCCAA CAGAAGAGAT AAGATGATTC CCAATGTGGT AGACCTGTCG
AAAGTTGAAG AATTGCATAG AGAACTGCAA AAAAGCAACG TACCGTTGCA CTTTTGCAGT
TGGTCGCCTA TACCTGGTCC TCTCGCGTAT TTATGGCATG AAGGTAAAAG CTTTGGAAGC
TTGCTGGAAA TGACGGAAAT GCAGGAAGGA GATATCTTTT CCATGCTGAG AAGAGAGATT
GATTTATTAA GACAGATAGA ATCAGCATTA AAGGATGACC CGGCCTTGCA AGCCAAAATA
CGCGGAGTCA GATTAAGCTT GGACAGGGAT GAAGTTTCTG TTTCGTTTTA G
|
|---|
| Protein sequence | MRYEDNSVYN SITETVKDRL PALFFVFSRG KTELIAEELS HDWDFLKPAE KKTVQQIVAD
FEKQNPTAFE RKNRRLLKRL LSRGIGYHHA GLSPVLKNLV ETLYERRLIY ALCCTETFAA
GVNFPACSTI FDSCRKWDGK TFRGLLNREF FQMAGRAGRR GFDEKGYVFV RIDEQYPEQT
TFFDEDEVES VNSHLTISPN TALNLLQWKT DAEIEHFLTN NFAVYQGKKE ERAVNIDIEA
ITAEIENLEQ HFCEERDTRT CALYRKKLKK ELYKHYRRRK NNPDYQSKID EIKEILDLPA
RDCAHSLCFS AKRNLGKLVS ERKRLNRQRE KLAGQHENYF DKFSSVCSLL EQLGYIEGRI
LLPRGIFASK IHIQEILVTE LIFSGIMSDA TPAEIAAIIV GIDYEANRRD KMIPNVVDLS
KVEELHRELQ KSNVPLHFCS WSPIPGPLAY LWHEGKSFGS LLEMTEMQEG DIFSMLRREI
DLLRQIESAL KDDPALQAKI RGVRLSLDRD EVSVSF
|
|---|
| |