Gene Dtox_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2022 
Symbol 
ID8429004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2193216 
End bp2193899 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content50% 
IMG OID645034349 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003191480 
Protein GI258515258 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.203611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.416027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAC TGATGGTAGT GGAGGATGAG ACTCCAATAG CTCTTGTACT CAGGGCATAT 
CTGGAAAAGG CCGGCTTTAG TACATACATA GCTGCAGATG GGGAGGAAGC CCTGCTTAAG
TTTTCAGAAA TCAATCCTTC ATTGCTGCTG CTGGATTTAA TGTTGCCGGG ACAGGACGGG
CTAAGTGTGT TGGAGAAGAT TCGCAAAACC AGTACCTGTC CGGTTATTGT AATTACTGCC
AGGGGGGCTG TTAAAGATCG CCTGCAGGGC TTTCACTTGG GAGCTGATGA TTACATCGCA
AAACCCTTTG ACCCTGATGA AGTGGTGGCC CGGGTGAAAG CCGTGCTGCG AAGGCCGGCG
CGAATTGTAG AGGCCGATCT GGTCCAATTC GGCCATTTGA CTGTAGACTT TACATCTTGC
AATGCGGTGT TAAAAGGGAG AAATATCAGC TTAGCCAGAA GGGACTGGGA CTTGTTGTCC
TTTCTGGTGC GCCATCCCAA CCAGGTTTTC AGCCGAACCC AGCTTCTGGA TTATGTCTGG
GGTATTGATT ATGACGGGGG AGATCGCGCT GTAGACGTGG CGGTTAAAAG GTTGCGGCAG
GCATTGAAGG ATTGGCCGTC GTCTGAAGGG GAGATAGCTA CCGTGAGAGG AACGGGGTAT
ATGTTAAGTG TTAAACAGAA GTAG
 
Protein sequence
MQTLMVVEDE TPIALVLRAY LEKAGFSTYI AADGEEALLK FSEINPSLLL LDLMLPGQDG 
LSVLEKIRKT STCPVIVITA RGAVKDRLQG FHLGADDYIA KPFDPDEVVA RVKAVLRRPA
RIVEADLVQF GHLTVDFTSC NAVLKGRNIS LARRDWDLLS FLVRHPNQVF SRTQLLDYVW
GIDYDGGDRA VDVAVKRLRQ ALKDWPSSEG EIATVRGTGY MLSVKQK