Gene Dtox_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2015 
Symbol 
ID8428997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2183398 
End bp2184264 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content44% 
IMG OID645034342 
ProductS-layer domain protein 
Protein accessionYP_003191473 
Protein GI258515251 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.859332 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.142835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG GGTTGATTAC ATTAGCAGTA TTTATATGCC TGGTATTCAG CCTAAGTGGC 
GGTGTTTCGG CAGCAACAAT TACTGATGTC AAAGGACACT GGGCAGAAGC TTCTATTAAT
AAATGGATAT CTGCCGGTTA TGTATCAGGT TACCCGGAGG GCTTGTTTAA ACCGAATCAA
AAAATAAGCA GAGCGGAATT CGTTACTCTG GTCAATAAGG CCTTTAAAAA GCAAAATCCG
AACAGCCAGT GCAAGTTTTC TGATGTAAAG CAAACAGACT GGTTCTACCC AGGTGTGCTT
GCCGGTGTTG CCGGTGGTTA TATATCCGGC TATGAGGGAG GCACGTTTAA ACCCGGCAAA
TTTATTAGTC GCCAGGAGGC TGCGGTTATA ATTACAAGAC TTCTTCAACT TAACAACGGC
AGCAATATGA ATTTTAAGGA TGCGAACAGC ATTCCCGGTT GGTCGGCAAG CGGAATTAAG
GCTGTGGTTG CCAATAACAT AATGAAAGGC TATTCCGACG GCACCTTCAA AGCCGCACAG
TCAATCACCA GGGCAGAGGC GGTAACAGCT CTGGACAGAG CATATGTTTC TTTCATGGCC
TTTCAAGGAG TCAAAGGGTC AGTTAAAATG AACAATTGTC CTGTGGAAGG TGCTCTGGTT
AAGCTCTTTG CACGGAATAA TCCCAGTGTG CTGAAAGATG TTAGTACAAC CGACAGTAAT
GGCATGTATA AGATAGCAGC CCAGCCCGGT TCGTACAATC TTGAGGTTAA TAAGGACGGC
AGCTTAGGCT ATGCCTATAA TATCAGTATA GGCAAGGGTA TTGCGACTTT ACAGGATTTT
TCACTGGTTA AGGTTTCTAT AAATTAA
 
Protein sequence
MKNGLITLAV FICLVFSLSG GVSAATITDV KGHWAEASIN KWISAGYVSG YPEGLFKPNQ 
KISRAEFVTL VNKAFKKQNP NSQCKFSDVK QTDWFYPGVL AGVAGGYISG YEGGTFKPGK
FISRQEAAVI ITRLLQLNNG SNMNFKDANS IPGWSASGIK AVVANNIMKG YSDGTFKAAQ
SITRAEAVTA LDRAYVSFMA FQGVKGSVKM NNCPVEGALV KLFARNNPSV LKDVSTTDSN
GMYKIAAQPG SYNLEVNKDG SLGYAYNISI GKGIATLQDF SLVKVSIN