Gene Dtox_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_2000 
Symbol 
ID8428982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2163749 
End bp2164387 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content40% 
IMG OID645034327 
ProductDNA binding domain protein, excisionase family 
Protein accessionYP_003191458 
Protein GI258515236 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.27976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.357405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATAAAT TACTGACAGT AAACCAGGTG GCAAAGTTAT TAAATGTTTG GCCGGAAACC 
GTCAGAAGAT GGGATAATAC CGGTCAGTTA ACTTCCGTAA GAACCCCTGG TGGTCACAGG
CGTTATAGGG AGTCACAGGT TCTGGCACTT TTAGGTACCC CCGAAACTAT CGGTGCACAG
CTGCGCTGTG CTGTTTACGC CAGGGTTGCC AATCAGGAAT ATGCTGATAA CGGGAGTTTG
CAGCGACAGA AAGAGAGATT AATTACTTAT GCGGTTGAAA AGGATTACCG TGTGGCAGCT
GTATATACGG AAATAAGCTC GGGTCTGAAA GAGAACAGGG AAGAACTTGC TAAATTGCTA
AAGCAGGCCA TAAAAGGGGA AGTTGACATT GTATTAACTG AAAATAAAGA TCGGTTGGCC
GGTTTGGGGT ACAATTATTT ACGGGAGTTT TTATTATCAT ATAAGGTGAA GATAGAGTTT
ATTGAATTGA ATGAAAAGTC TGAAAACCAG GATGAATTAC TGGAGGATTT AATATATATA
ATTACTTCTT TTTCTTCGAG GATATATGGA AAGCGTGGTA ATAGGGTAGC CAAAAAAATA
ACTGATATTA TTAAGGAAGA AATCTTATTG GTAAAGTAA
 
Protein sequence
MDKLLTVNQV AKLLNVWPET VRRWDNTGQL TSVRTPGGHR RYRESQVLAL LGTPETIGAQ 
LRCAVYARVA NQEYADNGSL QRQKERLITY AVEKDYRVAA VYTEISSGLK ENREELAKLL
KQAIKGEVDI VLTENKDRLA GLGYNYLREF LLSYKVKIEF IELNEKSENQ DELLEDLIYI
ITSFSSRIYG KRGNRVAKKI TDIIKEEILL VK