Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_2000 |
Symbol | |
ID | 8428982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 2163749 |
End bp | 2164387 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 645034327 |
Product | DNA binding domain protein, excisionase family |
Protein accession | YP_003191458 |
Protein GI | 258515236 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2452] Predicted site-specific integrase-resolvase |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.27976 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.357405 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGATAAAT TACTGACAGT AAACCAGGTG GCAAAGTTAT TAAATGTTTG GCCGGAAACC GTCAGAAGAT GGGATAATAC CGGTCAGTTA ACTTCCGTAA GAACCCCTGG TGGTCACAGG CGTTATAGGG AGTCACAGGT TCTGGCACTT TTAGGTACCC CCGAAACTAT CGGTGCACAG CTGCGCTGTG CTGTTTACGC CAGGGTTGCC AATCAGGAAT ATGCTGATAA CGGGAGTTTG CAGCGACAGA AAGAGAGATT AATTACTTAT GCGGTTGAAA AGGATTACCG TGTGGCAGCT GTATATACGG AAATAAGCTC GGGTCTGAAA GAGAACAGGG AAGAACTTGC TAAATTGCTA AAGCAGGCCA TAAAAGGGGA AGTTGACATT GTATTAACTG AAAATAAAGA TCGGTTGGCC GGTTTGGGGT ACAATTATTT ACGGGAGTTT TTATTATCAT ATAAGGTGAA GATAGAGTTT ATTGAATTGA ATGAAAAGTC TGAAAACCAG GATGAATTAC TGGAGGATTT AATATATATA ATTACTTCTT TTTCTTCGAG GATATATGGA AAGCGTGGTA ATAGGGTAGC CAAAAAAATA ACTGATATTA TTAAGGAAGA AATCTTATTG GTAAAGTAA
|
Protein sequence | MDKLLTVNQV AKLLNVWPET VRRWDNTGQL TSVRTPGGHR RYRESQVLAL LGTPETIGAQ LRCAVYARVA NQEYADNGSL QRQKERLITY AVEKDYRVAA VYTEISSGLK ENREELAKLL KQAIKGEVDI VLTENKDRLA GLGYNYLREF LLSYKVKIEF IELNEKSENQ DELLEDLIYI ITSFSSRIYG KRGNRVAKKI TDIIKEEILL VK
|
| |