Gene Dtox_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1939 
Symbol 
ID8428921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp2059052 
End bp2062186 
Gene Length3135 bp 
Protein Length1044 aa 
Translation table11 
GC content45% 
IMG OID645034269 
Productacriflavin resistance protein 
Protein accessionYP_003191400 
Protein GI258515178 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAATTAG CAGATATATC TGTTGATCGC CCCGTCGCCA TTTCCATGTT AATCATTGCC 
CTGATTGTTC TTGGCCTTTT CTCTTTACCT CGCCTGGCGG TGGATCTCTA TCCGGATATG
GAACTGCCCT ATGCTGTTAT TTCAACCTCC TATGAAGGGG CGGCACCGGC TGAAGTAGAA
CAGTTAATCA CCAAGCCCTT GGAATCAGCG GTGGCAACAA CTGAAGGTAT CAAGGAAGTA
CGCTCAAATT CACAAAACGG TTTCTCTTTG GTAATTGTCA TATTTAACTG GGGCACCAAT
ATGGACAATG CCACCAATGA TTTGCGTGAA AAAATTGATT ATGTTCGTGG AATGCTGCCT
GATGATGCCG GTTCTCCCAG AGTCATGAAG TTAGATCCCA ATCAGGCACC AATCATCTCA
TTCTCAATTA CCGGTGCCCA AGGAGATGTC GTAAAGCTTA AGAAAATAGC CGAGGACGAT
ATTCAGCCTA AGCTGGAACG GATAGGTGGT GTCGCTTCCG TATATATAAG TGGCGGTAAA
ACACGGGAAA TTAAAGTTAT CTTAGATCCA GCTAAAATAG AAGCCTACGG TTTAAGTGTT
AACCAAGTTA TGCAGGCCAT CTCGTCTGAT AACGTTAACG GTACTGCCGG TGTTGTGGAC
AAAGGCTCTA CTGAAACTTC CATTCGAGTA GTTGGTGAAT ATAAAAGCAT CGATCAGCTG
AAGAAAATTC AGGTTAGTTT AGCTAACGGC AACTATATTG CTCTGGAAAA TCTGTCCACC
GTTGAAGATT CTTTCAAAAA AGAAAGTCAG TTTACCTTTG TAGACGGCAA AACCTCCCTG
GGTCTGAATG TTATGAAAGC TACTGGGGGG AATACCGTTC AGGTGGCCAA ACAGGTTATG
GCGGAGGTAG AAAAATTAAA TAAGACACTG CCCGATGGAG TCAAGATTAC CACCATCATG
GATACTTCCA AATTTATTAA GGACTCCATT AATAACGTTG TGGATCACGG CCTAATGGGT
GGTATCTTTG CTGTATTTGT CCTATACCTG TTCCTGCGCA ATGTCCGAAG TACCCTTGTG
GTTGTGCTGG CTATTCCGAT TTCTATCATT GCCACCTTCT CCTTAATGTA CTTTGGTGGC
CAAACCATCA ACATGCTTTC TCTGGGCGGT CTAATCCTGG GTATGGGTTC CCTGGTAGAC
TTTTCAGTGG TAGTTTTGGA AAGCATCTAT CGCTACCGGC AAAGTGGTTT TGGCATTATT
GAAGCTGCCA AACAAGGTAC CTCTGAAGTA GTCAATGCTG TTACTGCTTC CGCATTAGCT
CAGGTAGTAG TATTCATGCC CATTGTATTC GTGCAGGGAA TAGCTGGGAT TTTATTTAAG
CCTATGGCCT TAACCGTAAG TTTTTCCCAC ATTGCAGCAC TTTTTGCCGC GATAACCCTG
GTTCCGATGT TGTCTGCCCG GTTGCTTAAG AATGTTGCTC CTGCAAACGA AGCATTACCC
GAGGGTAAAA CTAAAAGTCC AGTGGCAATT TTTGGTAAGT TCTTATACAA ATTGAATGAA
CGCTATGGTC GAGTTTTAGG ATGGTCACTG AAAAACCGTA AAAAAGTTGT GGGACTAACT
GCTGTTCTGT TCATTGCCAG CATTGCAGCC ACACCTTTAA TTGGAACTGA ATTTATGACA
ACTATGGACC AAGGTGAACT TACGGTTAAT ATTGATATGC CTGCAGGTAC TAAAGTGGAA
GAAACCTCCC GGGTTGCCAG TGACCTTGAA AAATTGGCCC GTCATCAGGT AAAGGAAATT
GAGCGTATTT TTACCACTGT TGGCAGTGGC GGCGAGCTCT CCTTTCTCGG AGGCAGTGCC
AGTGATAAGG CCTCACTGCA AATAAAGCTT ATACCCTTAA AAGAACGAAC TATTACTACA
GAGCAAGCTG CGGAAAAACT TCGCCAGAGC ATGCAAAATG TCCCCGGTGC TGATATTACT
GTAAATCTTT CAGATAGTTC CGGTGGTCCT TCCAGCACCG CGGTGGATAT TGCCATCCAA
GGTGATGATT TAACGGTCCT CGAACAAATC GGTGATTTGC TGGTGGAAAC TGTTAAAGGT
GTTGAGGGCA CGAGAAACGT GACCAACTCC TTGACTGAAG CCAGTTCTGA AATGCGTATT
AATGTTGACA GAGAGCAAGC TGCCCGCTAT GGACTGTCAG CCAGTCAGAT ACTCTCGGCA
GTCAGTACAT CCTTTGACGG TAAAGTGGTG AGCAGTATGC GTACCGGTGA TGATGAAGTG
GATGTGCGTA TGATTACTCC GGAAGATACG AATAAGAGTA TTGCCAACCT GAATAACCTA
ACCATCGTCT CACCAACAGG CGCCAGGGTA CCTGTTTCGG CGGTGGCCAG TGTCGAATCG
CATCGTGTAC CAACCGAAAT TACACGTACT GACCAGACCC GGGAGGTTCG GATTACTGCG
GATGTAACCG GCCGTGACGT AGGTAGTGTT AATAAGGATA TCCAGACAGC AATCAGTAAA
CTTGCCTTAC CGGATGGCTA CACTGTTAAT TACGGCGGAC AGGCTGAAGA TATGGCGGAA
TCCTTTGCAA GTTTGGGCAT GGCCTTAATA CTCTCAGTGT TACTCGTGTT TATGGTAATG
TCTGCTCAAT TTGAATCCTT ATTCCAACCA TTTATTATTA TGTTTTCGTT ACCGCCAACC
TTTATTGGAG CGATTTTTGG TCTGGGTATT ACGGGAAACC CCATCAGTGT AACAGCTATG
ATTGGTGCGA TTATGCTGAT AGGAGTTGTA TTAAATAACG CTATTGTGCT GGTGGACTAC
ATTAACGTTC TGCGCAAAAA GGGGCATCAG CGTGATGAAG CAATTTTAAT GGCCGGACCG
ATCAGACTGC GTCCAATTTT GATGACTGCT TTAACTACCG TGCTGGCTCT GCTGCCTATG
GCCTTTGGTA CCGGTGAAGG TGCCGAAGCT CAGGCCCCAA TGGCTATTGT AATTGCCTTT
GGTTTAACCT TTTCAACGGT CATTACACTG GTACTGGTAC CCGTAGTTTA TACCATATTT
GACGACTTGG GTAAGAAAAT ATCCGGTAAA TTTAGCAGAT TACGTTTGCC AGGATTTAAA
ACAAAACAAG CTTAA
 
Protein sequence
MKLADISVDR PVAISMLIIA LIVLGLFSLP RLAVDLYPDM ELPYAVISTS YEGAAPAEVE 
QLITKPLESA VATTEGIKEV RSNSQNGFSL VIVIFNWGTN MDNATNDLRE KIDYVRGMLP
DDAGSPRVMK LDPNQAPIIS FSITGAQGDV VKLKKIAEDD IQPKLERIGG VASVYISGGK
TREIKVILDP AKIEAYGLSV NQVMQAISSD NVNGTAGVVD KGSTETSIRV VGEYKSIDQL
KKIQVSLANG NYIALENLST VEDSFKKESQ FTFVDGKTSL GLNVMKATGG NTVQVAKQVM
AEVEKLNKTL PDGVKITTIM DTSKFIKDSI NNVVDHGLMG GIFAVFVLYL FLRNVRSTLV
VVLAIPISII ATFSLMYFGG QTINMLSLGG LILGMGSLVD FSVVVLESIY RYRQSGFGII
EAAKQGTSEV VNAVTASALA QVVVFMPIVF VQGIAGILFK PMALTVSFSH IAALFAAITL
VPMLSARLLK NVAPANEALP EGKTKSPVAI FGKFLYKLNE RYGRVLGWSL KNRKKVVGLT
AVLFIASIAA TPLIGTEFMT TMDQGELTVN IDMPAGTKVE ETSRVASDLE KLARHQVKEI
ERIFTTVGSG GELSFLGGSA SDKASLQIKL IPLKERTITT EQAAEKLRQS MQNVPGADIT
VNLSDSSGGP SSTAVDIAIQ GDDLTVLEQI GDLLVETVKG VEGTRNVTNS LTEASSEMRI
NVDREQAARY GLSASQILSA VSTSFDGKVV SSMRTGDDEV DVRMITPEDT NKSIANLNNL
TIVSPTGARV PVSAVASVES HRVPTEITRT DQTREVRITA DVTGRDVGSV NKDIQTAISK
LALPDGYTVN YGGQAEDMAE SFASLGMALI LSVLLVFMVM SAQFESLFQP FIIMFSLPPT
FIGAIFGLGI TGNPISVTAM IGAIMLIGVV LNNAIVLVDY INVLRKKGHQ RDEAILMAGP
IRLRPILMTA LTTVLALLPM AFGTGEGAEA QAPMAIVIAF GLTFSTVITL VLVPVVYTIF
DDLGKKISGK FSRLRLPGFK TKQA