Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1914 |
Symbol | |
ID | 8428893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 2026780 |
End bp | 2028441 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645034244 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_003191378 |
Protein GI | 258515156 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.33952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.193822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAACGA AGCATGATTT TGTGCAGCAT AACTGTGATC ATTACGACGG TAACAGGTAT GACCATTTGG ATAAACGAAA ATATGGTGAA GAAGCTGATA TATGTATTGT CGGTGCAGGT GCTGCCGGAG GAGTGTTGGC TTACGAACTA AGTCAAGCCG GCTTTAAAGT GGTTGTCATT GAGGCAGGAC CTTTTTGGAA CCCGCAAACT GATTTTGCCA GTGATGAGTT GTCCATGCAC AGCTTGGCCT GGAATGATAC TAGATTAGTT GCAGGCAATA ACCCACTGGC AATGGGACAT AACAATTCGG GACGCGGGGT AGGCGGAGGT ACAGTTCATT TTACCGGTGT ATTTTACCGT TTTCACGAGA GTGATTTTCA ACTAAGAACT ATGGATGGTG TAGCCGACGA TTGGCCAATT ACATATAAGG ATCTCGAACC ATATTATGAA AAAATTGAAA AAGATATAGC GGTATCAGGT CCCAAGCATT TCCCCTGGGG TCCTTTTCAA GGACCATACC CCTACCCGGA ACGGGAACCT ATCAGTGCTA ACTCTGAACT GTTTCGAAGA GGTTGTGAAA AGCTGGGCAT AAGAAGTGCA GTGGCTCCTT TGGCCATACT ATCAGCCCCT TTTGACGGAC GTCCACCTTG CATTAACAGA GGATTTTGTA ATCAAGGTTG TTTGCCCAAC GCTAAGTTCA GTACTTTGAT TCATTATATA CCTAAAGCCA TAGGACACGG GGCTGAGGTG CTTAGTGATT GTATGGTTAC ACAAGTTGTT GTAGATAAAA GCGGTAGAGT AACGGGAGTT ACCTTTATCC ATGATGATAA GGAATATTTC CAAAAAGCCA AGATAACTAT AATCTCGGCC TTTTGTATTG AAACACCAAG ACTATTATTA CATTCAGCCT GCCCCATGTT TCCAAACGGA CTTGCTAACA GCAGCGGTAT GGTAGGTAAA GCGTTGATGA CCCATACCGG GCATGATATA TATGCAAAAT TCCACGATGA GGTACGTATC TATAAGGGAA CGCCTGTGAT GGCAGTATCC CAGGAATTTT ATGAAACTGA TAAATCAAGG GGCTTTGTTA AAGGATATAC CCTTAATGCC CATGGCTCCA GGCCTCTGGG TCTGGCTAAA AATCTAGTCT CTAAGGCTGA TATTTGGGGC GAGAAACTAT ACGACATCAT GCGAGACTAT AATTTTTACG CTCAGATTAC CATGGTAGGA GAAGTGCTTC CTGATAACAA TAATTCTGTA ACATTAAGCA ACGAAAAAGA TGAGTATGGG ATACCTAGAC CTATAATTAC TTTTAGTTAC GGTGAGAATG ACAATAAATT AATCGTTCAC GGGGTGCAAA AAGCTAATGA AATATTGGAG GCTACCGGTG GTAAACCTGC CTTTGTGATT CCTGATACCG GTCACCTAAT GGGCACCTGT CGAATGGGTA ATAACTCATC TACTTCTGTG GTAGACGGAT TTTGCCGCAG CCATGATATT CCTAACCTTT ATATTTGCAG TGCTGCTGTT TTTGTGACCT CCGGTGGGTG TAATCCTACA GAAACGGTTA TGGCTATCGC CGCTAGGACA GCGGATTATA TCATTGAAGA GGCAAAAAAG GACGGTCAGT ATGGAATGAG AAAAACTTCC TCCATGACAT AA
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Protein sequence | MPTKHDFVQH NCDHYDGNRY DHLDKRKYGE EADICIVGAG AAGGVLAYEL SQAGFKVVVI EAGPFWNPQT DFASDELSMH SLAWNDTRLV AGNNPLAMGH NNSGRGVGGG TVHFTGVFYR FHESDFQLRT MDGVADDWPI TYKDLEPYYE KIEKDIAVSG PKHFPWGPFQ GPYPYPEREP ISANSELFRR GCEKLGIRSA VAPLAILSAP FDGRPPCINR GFCNQGCLPN AKFSTLIHYI PKAIGHGAEV LSDCMVTQVV VDKSGRVTGV TFIHDDKEYF QKAKITIISA FCIETPRLLL HSACPMFPNG LANSSGMVGK ALMTHTGHDI YAKFHDEVRI YKGTPVMAVS QEFYETDKSR GFVKGYTLNA HGSRPLGLAK NLVSKADIWG EKLYDIMRDY NFYAQITMVG EVLPDNNNSV TLSNEKDEYG IPRPIITFSY GENDNKLIVH GVQKANEILE ATGGKPAFVI PDTGHLMGTC RMGNNSSTSV VDGFCRSHDI PNLYICSAAV FVTSGGCNPT ETVMAIAART ADYIIEEAKK DGQYGMRKTS SMT
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