| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1882 |
|---|
| Symbol | |
|---|
| ID | 8428861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1994160 |
|---|
| End bp | 1994813 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 645034217 |
|---|
| Product | thymidylate synthase, flavin-dependent |
|---|
| Protein accession | YP_003191351 |
|---|
| Protein GI | 258515129 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1351] Predicted alternative thymidylate synthase |
|---|
| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0694605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.133921 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTAA CACTTATAGA AAATACTTCA CCTCTGGCCG TAGTGAAAGC GACAGCCATG
CCGTACCAAA GTAAGGAAAG CCTCGATGTT GTGGGCCGGG TGTGGGATAG CGGGTATCGT
AGTGTGGCCA GGCATGGAAC AGCCTCTTTT CTGGTGGAAG GAGTTAGCCA AAGTTTACTC
CGGCAGTTAA GCCGCCACCC GCATATTAAC TTAACCGTGA AATCCTCGCG GTACTGCGAT
ATGGCCGAGG TGGAAACAGT TATACCTCCG TTTATTAGCA TGACTGACCG ATTTGAGTTT
AACGATGACT ACGAAAAAAT AATGTGTATA TATAAGAAGT GGGCCAGCCG CGAGGCTTAC
AGCCGTGGCC AACGCCAGGA ACTGGCCAAG CTGATGCTGC CACTCGGAAG CACTACTAAT
TTAGTGCTTT CCGGCAACTA CCAAGCCTTA TACGAATTTA TTCAACTTCG ACTTTGTGTG
AGAGCTGAGT GGGAGATTCG AGAACTGGCA CAGCAGATAA GAAATATGCT GGTTGATATT
ATGCCGGTGA TATTCGAGAG GATGGGTTGT AAGGGTGATG AACTGAGGTA CTGTCCAGAG
ATTAACGGGG GATATCGTAA ACATCCAATA ATGCATCTAA GTAAAAAATG CTAG
|
|---|
| Protein sequence | MKVTLIENTS PLAVVKATAM PYQSKESLDV VGRVWDSGYR SVARHGTASF LVEGVSQSLL
RQLSRHPHIN LTVKSSRYCD MAEVETVIPP FISMTDRFEF NDDYEKIMCI YKKWASREAY
SRGQRQELAK LMLPLGSTTN LVLSGNYQAL YEFIQLRLCV RAEWEIRELA QQIRNMLVDI
MPVIFERMGC KGDELRYCPE INGGYRKHPI MHLSKKC
|
|---|
| |