Gene Dtox_1881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1881 
Symbol 
ID8428860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1993408 
End bp1994136 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content39% 
IMG OID645034216 
Productcell wall hydrolase SleB 
Protein accessionYP_003191350 
Protein GI258515128 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.131836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.315565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGAA ATATCACGGG TTTATTCGTG GCAGGATTAA TATTAACATT TTTATGGGTG 
GCCAATCCAG CAGAGGCTTA TACCTGGAAC AGTATTACAA ACACCCGTTT TATTTATTAC
AACTATAACT ACGGTTATTT TGAACAAATG CCGCCACTAA CAGCAACTAA ATCTGCATAT
AGCGGTAACG CCGCTTCATA TACGGTGAAG TGGGGAGATA GTCTCTGGCT TATATCGCAA
AAACTGGGTG TTTCAATAAA CTCGTTAAGA ACAGTAAATA GTTTATGGAA CGACAATCTT
TATCCTGGGG AGGTGCTTTA TTATGTTAAA TCAACTAATC AATCATCTAC TGGAACAACT
TCTCAGAAGG CTTTTACGCA GAGTGATATT GATCTGATGG CAAGAGTAGT TTATGCCGAA
AGCCGGGGCG AACCTTATAA AGGTCAGGTG GCTGTAGCTG CTGTAATAAT TAACCGTTTA
AACAATCCTA ACTTTCCTAA AACAGTGTAT GAAATAGTTT ATCAACCTTG GGCATTTAGT
AGCACTATAG ACGGGCAAAT TTACTTAACG CCGGATTCTA TCGCATATAA AGCGGTGTAC
GACGCAATCA ATGGATATGA CCCGTCCTAT GGTGCTTTAT TTTTCTATAA CCCTGCTCTT
TCAACAAGTA CATGGATTTT TACCAGGCAG GAGACTGTTC GAATTGGCAA CCATATTTTT
GCCAAATAA
 
Protein sequence
MLRNITGLFV AGLILTFLWV ANPAEAYTWN SITNTRFIYY NYNYGYFEQM PPLTATKSAY 
SGNAASYTVK WGDSLWLISQ KLGVSINSLR TVNSLWNDNL YPGEVLYYVK STNQSSTGTT
SQKAFTQSDI DLMARVVYAE SRGEPYKGQV AVAAVIINRL NNPNFPKTVY EIVYQPWAFS
STIDGQIYLT PDSIAYKAVY DAINGYDPSY GALFFYNPAL STSTWIFTRQ ETVRIGNHIF
AK