Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1862 |
Symbol | |
ID | 8428841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1976045 |
End bp | 1977727 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 645034197 |
Product | transposase (IS4 family protein) |
Protein accession | YP_003191331 |
Protein GI | 258515109 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0324355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.381496 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACC AAATACTACA AAATATTAAT AGCTTACAGG TGGGGCCCAG CGCAATAATA GCTGCACTTA CCCGAGAAAT AAATTTAGTA CAAATCATTA ACAATCAGGT AATCTGGGAT GAAAAACAAT GTAATAATTC ACCAGGCCTT TATGTAGAAG CTATGATTAT AAACATATTG ACAGACCGAA AACCTTTGTA CCGAGTATCT GAATTTTTTA AAGATATGGA CGTAGAAGCA TTATTTGGTC CAACGGTACA AGCAACTGAT TTCAACGACG ATGCTTTAGG AAATACATTG GATCGATTAG CTGAATCAAA TCTAGACCAT TTGTATTCTA ACATAGTTTT ACAAGCACAT TTAAAACACC GTTTTAGAGT AGATTTAGCA CATGGTGATA CTACATCCAT TACTGTTTAT GGAGATTATG CCAATGCTTC GTCGGAGACA TTAAACATAG TTCGAGGATT TAACAAAGAC GGCCATCGGG ACTGCAAGCA GATAGTAGCT GGTGCAGTAG TAACTCCCGA AGGAATACCT CTTATGGGAA CAATAAACGA TGGCAACTTA AACGATGTGA AATGGAATCA ACAAATAATC GAACAATTGC CGGAAATGTT AAAATCACTT AATAGTCCAG AAACCATATA CGTAGCTGAC TCAAAACTGG TTACCATAGA TAACCTAAAA CATTTAGCCA AGAAAAACAT TCGCTTCATA TCCCGAATTC CTGAGACATT TGGAATAGTA CCGTCACTTA AAGATTGGGC CTTTCGCCAA GATAAGTGGC AAGAAATAGA GAATATATTG CCGGATAAAA ACGCTGCTGT ATATAAGCTT CAGTCCATAA AAGTGAAATT GGGCGACCGT CGTTACCGGT TTATTATCGT ACATTCATCA AATCTTGATC AAAAGAAAGA AAAAACATTG AAGCGTACTG CTGAGAATGA ACAGAAAAAA CTAGAAAAAA TCTGTAAAGA AATTGGTAAA CAAGAATTTG CTTGCGAAAA AGATGCCATC TCGTACTTAA GACATATGAA AAAGAAACAG GACGGACAGT TCTACCATTT AGATGCAGAA GTAATTGCTG AAGAAAAAAA AGGTGTAGGG CGCCCCAAAA CAAAAGAAAA GTCCCCCATA AAAATAGTTT ATCGCATAAA GGCTATAGTT AGTGTAATGG ATGAAACGGC CTGGCAAATG GCAAAAGAAA GGGCATCAAC ATTTGTACTG ATCACCAATT TAAAAAATCC AAGGGAAAAT ACAGCAGAAA CAATCCTTCG GCATTACAAA GAACAAAACA CAGTGGAAAT GCGCTTTCGC TTTCTAAAAA ACCCCGCAAT ATTAGGTCAA GTCTTTTTGA AAAAGCCGTC AAGAGTAAAA GCACTTGGAT ATATATTCTT GATAACCATG TTAATTTATG CACTTATGGA ACGTAGAGTT AGACAAAATC TAGCCGCAGA AGGGAAAGTC CTTCAATTAA GCTATCGTTC AAAAGTTAAA CAACCAACAG GAATGTTGAT TTTGCAAGAG ATGACGAACT TTACAATAAT TCATATTACC CGTAAATTAG GAAGAAGAGA GAGGTATCTA CCAACCAAAA CAAGCAAACA ACAATTAGAA ATAATCCGAT TGACAGGATT TGATGAGTCG ATATACCTAA AAGAATTATC TATAGTATCA TAA
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Protein sequence | MENQILQNIN SLQVGPSAII AALTREINLV QIINNQVIWD EKQCNNSPGL YVEAMIINIL TDRKPLYRVS EFFKDMDVEA LFGPTVQATD FNDDALGNTL DRLAESNLDH LYSNIVLQAH LKHRFRVDLA HGDTTSITVY GDYANASSET LNIVRGFNKD GHRDCKQIVA GAVVTPEGIP LMGTINDGNL NDVKWNQQII EQLPEMLKSL NSPETIYVAD SKLVTIDNLK HLAKKNIRFI SRIPETFGIV PSLKDWAFRQ DKWQEIENIL PDKNAAVYKL QSIKVKLGDR RYRFIIVHSS NLDQKKEKTL KRTAENEQKK LEKICKEIGK QEFACEKDAI SYLRHMKKKQ DGQFYHLDAE VIAEEKKGVG RPKTKEKSPI KIVYRIKAIV SVMDETAWQM AKERASTFVL ITNLKNPREN TAETILRHYK EQNTVEMRFR FLKNPAILGQ VFLKKPSRVK ALGYIFLITM LIYALMERRV RQNLAAEGKV LQLSYRSKVK QPTGMLILQE MTNFTIIHIT RKLGRRERYL PTKTSKQQLE IIRLTGFDES IYLKELSIVS
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