Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1857 |
Symbol | |
ID | 8428836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1972009 |
End bp | 1972653 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 645034193 |
Product | SCP-like extracellular |
Protein accession | YP_003191327 |
Protein GI | 258515105 |
COG category | [S] Function unknown |
COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
TIGRFAM ID | [TIGR02909] uncharacterized protein, YkwD family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.539147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAA AAAAGTTAAA TATAATTCTT GTGATGGTAG CTGTAGCTAT ATCTCTCGCT GTCTATTATT ACAGCACCAT TAGGTTGACT ACTGCGACAA AAGGCACAAT AAGCCCAGGA AGTAATGTTA TTTACACAAC TAACAGTCAA TCCGTTTATA ACCTACTGAA AAAATATGGC TTCAACGTAA AGATGGTTAC TAACAACACA AAACCGTCAA ATCCTGCACT GGCTCCTACC TCGACAACCG CACAGGGATT ATCTGCCGAC GAGCAGACTA TGTTTAATCT GGTCAATAAA GAGAGGGTGG CCAACGGGTT AAAGCCGCTG GAGCTTGATA TGCGATTGGT TAAGACCGCC AGACTGAAAT CGCAAGATAT GGTTAAACTC GGTTATTTCG ACCATCAATC GCCAACTTAC GGCTCACCGT TTGATATGAT GAAGCAATTC CGTATTAGCT TTAGCTACGC TGGGGAAAAT CTGGCCGGGT CACCGGATGT TAATACTGCT CATGTTAACT TGATGAACTC GCCGGGCCAC AGGGAAAACA TTCTGAGGCC AGAGTTTACC CATATTGGGA TCGGTGTTTT TGATGGTAGC CGTTATGGTA AAATATTTAC TCAGCAATTT ATTAGGGTGG AATAG
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Protein sequence | MKAKKLNIIL VMVAVAISLA VYYYSTIRLT TATKGTISPG SNVIYTTNSQ SVYNLLKKYG FNVKMVTNNT KPSNPALAPT STTAQGLSAD EQTMFNLVNK ERVANGLKPL ELDMRLVKTA RLKSQDMVKL GYFDHQSPTY GSPFDMMKQF RISFSYAGEN LAGSPDVNTA HVNLMNSPGH RENILRPEFT HIGIGVFDGS RYGKIFTQQF IRVE
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