Gene Dtox_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1857 
Symbol 
ID8428836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1972009 
End bp1972653 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID645034193 
ProductSCP-like extracellular 
Protein accessionYP_003191327 
Protein GI258515105 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID[TIGR02909] uncharacterized protein, YkwD family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.539147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCAA AAAAGTTAAA TATAATTCTT GTGATGGTAG CTGTAGCTAT ATCTCTCGCT 
GTCTATTATT ACAGCACCAT TAGGTTGACT ACTGCGACAA AAGGCACAAT AAGCCCAGGA
AGTAATGTTA TTTACACAAC TAACAGTCAA TCCGTTTATA ACCTACTGAA AAAATATGGC
TTCAACGTAA AGATGGTTAC TAACAACACA AAACCGTCAA ATCCTGCACT GGCTCCTACC
TCGACAACCG CACAGGGATT ATCTGCCGAC GAGCAGACTA TGTTTAATCT GGTCAATAAA
GAGAGGGTGG CCAACGGGTT AAAGCCGCTG GAGCTTGATA TGCGATTGGT TAAGACCGCC
AGACTGAAAT CGCAAGATAT GGTTAAACTC GGTTATTTCG ACCATCAATC GCCAACTTAC
GGCTCACCGT TTGATATGAT GAAGCAATTC CGTATTAGCT TTAGCTACGC TGGGGAAAAT
CTGGCCGGGT CACCGGATGT TAATACTGCT CATGTTAACT TGATGAACTC GCCGGGCCAC
AGGGAAAACA TTCTGAGGCC AGAGTTTACC CATATTGGGA TCGGTGTTTT TGATGGTAGC
CGTTATGGTA AAATATTTAC TCAGCAATTT ATTAGGGTGG AATAG
 
Protein sequence
MKAKKLNIIL VMVAVAISLA VYYYSTIRLT TATKGTISPG SNVIYTTNSQ SVYNLLKKYG 
FNVKMVTNNT KPSNPALAPT STTAQGLSAD EQTMFNLVNK ERVANGLKPL ELDMRLVKTA
RLKSQDMVKL GYFDHQSPTY GSPFDMMKQF RISFSYAGEN LAGSPDVNTA HVNLMNSPGH
RENILRPEFT HIGIGVFDGS RYGKIFTQQF IRVE