Gene Dtox_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1855 
Symbol 
ID8428834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1970994 
End bp1971620 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content41% 
IMG OID645034191 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_003191325 
Protein GI258515103 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5632] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.653374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.622298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAATA TTAGCGTAGA TTTACTGTCG GTAGGAGCTA AGAACAGACC AGGTAATCCA 
ATGACTCCGA AGTATATTAC TGTTCATAAT ACGGGTAATA CTGCCAAGGG TGCTGATGCT
TTAGCTCATG CTGCTTTCTT GAAAAACTCG AATGATTCTA CTGGATGGCA TTTTACTGTT
GACGACAAAA GGATTGTTCA GCATATACCC TGTTGGGAAA ACGCCTGGCA CGCAACCGAT
GGGCATGGGC CGGGCAATGT TTCTAGTATA GGCATTGAGA TTTGTGTTAA CTCGGATGGT
GATTACGAAA AAGCAGAAGC TAATGCCATT GAGCTAATCC GTTACCTGAT GGACAAGTAT
AAGATACCGC TAACAAACAT TGTGCCACAC CAAAAATGGT ATCCAGCTAA GTATTGCCCA
TATAAAATTT TACCGAGGTG GAATGAGTTT ATTAGTGAAA TTAAACAGCC GGATAAGGTA
GTTTATACTG TAGTGGCTGG TGATAACTTA ACGAAAATTG CTGCCAAGTT CGGAGTATCC
TTGGCCGCCA TCAAAGGTGC GAATTCGCAG ATTAAAGATT TTAGCCTGAT TCACATCGGG
GATAAGATTA ATATCCCGTT AAGCTAA
 
Protein sequence
MVNISVDLLS VGAKNRPGNP MTPKYITVHN TGNTAKGADA LAHAAFLKNS NDSTGWHFTV 
DDKRIVQHIP CWENAWHATD GHGPGNVSSI GIEICVNSDG DYEKAEANAI ELIRYLMDKY
KIPLTNIVPH QKWYPAKYCP YKILPRWNEF ISEIKQPDKV VYTVVAGDNL TKIAAKFGVS
LAAIKGANSQ IKDFSLIHIG DKINIPLS