Gene Dtox_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1800 
Symbol 
ID8428772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1902752 
End bp1903870 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content37% 
IMG OID645034135 
Productpolysaccharide deacetylase 
Protein accessionYP_003191276 
Protein GI258515054 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.358756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.150786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGAA GAGCAGAAAT AACCATAATT TTTATAATCA TAATCACGAT TTTCAGCGCA 
ACTCAGAGTA ATGCACAAAC TATACAATGG TTAGCTGCTA AATACCCTGA AATAATGATA
AACAGAAGTT ATTCACATGA TAAGATTGTT GCCCTGACTT TTGATGACGG GCCGGATAAT
AAAATAACCC CACAGATTTT AAAAGTCTTA AAAGAAAAAA AAGTTAATGC TACCTTTTTC
GTTATAGGCA TTAACGCTGC CAAGTATCCG GACATATTAA AACAGATAAG CCAGGACGGG
CATGTCATTG GTAATCATAG CTGGTTTCAT GCCAGCAATT ATAACAGGGA TAGCTTAATT
AATGAGATAT TGGATACGGA AAAAATCATT ACCAAGGCTA CAGGGCAAAA TATTCATCTT
TTCAGACCAC CCTTTGGCAA TCTAGACGAG CAATCTTTAA TTGCTCTACA TGATTTAGGC
TTTAAAATAA TCGGCTGGAG CTCAGACTCT CAGGACTGGC GCGGCATATC CAGTGAAAAA
GTTACTTCTA ATATTTTTAA AGATGTTTCG CCGGGCGCCA TTATACTGCA GCATAGTTAT
AATAATCCCA AGCTGATTAA TACAATAAGC GCACTGCCGG AGATAATTGA CCGGTTGCGG
AGGGAAGGAT ATACTTTGGT TACTATACCG GAACTGCTTA TAAACGCAGG ACCGGTAGTA
GTAAAAATCA ACCAAAAAAC CGTTAATTTT TCTGAAGCTA AATGTTCACC TAAAATAATA
AATAACACCC TATACTGCCC TCTTAGGACC ACCCTTGAAA AATTAGGAGT TCAAATTTAC
TGGAATGAAG AAAACAAAGC CATAACCATC ATCAAAAACA CTAATATAAT TAAGATGAGT
ATCGGAAGCC AAGTTGCTTT CGTCAATAAC CGGCAGGTTT TCTTAGAGAA CCCTCCTCGA
ATAGATCCTG TTTCCGGGCA AGCTCTGGTA CCTATTCGCT TTATTTGCAA CAGTATGGAT
GCACTTATTG ATTTCAATAA AAATGGTTCA CATGTAGAAA TCAATATCAT ATATGACACT
CAAAACATAA ATGGCATATT TTCCGGTCAA CTTGCTTAA
 
Protein sequence
MIRRAEITII FIIIITIFSA TQSNAQTIQW LAAKYPEIMI NRSYSHDKIV ALTFDDGPDN 
KITPQILKVL KEKKVNATFF VIGINAAKYP DILKQISQDG HVIGNHSWFH ASNYNRDSLI
NEILDTEKII TKATGQNIHL FRPPFGNLDE QSLIALHDLG FKIIGWSSDS QDWRGISSEK
VTSNIFKDVS PGAIILQHSY NNPKLINTIS ALPEIIDRLR REGYTLVTIP ELLINAGPVV
VKINQKTVNF SEAKCSPKII NNTLYCPLRT TLEKLGVQIY WNEENKAITI IKNTNIIKMS
IGSQVAFVNN RQVFLENPPR IDPVSGQALV PIRFICNSMD ALIDFNKNGS HVEINIIYDT
QNINGIFSGQ LA