Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1800 |
Symbol | |
ID | 8428772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | - |
Start bp | 1902752 |
End bp | 1903870 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 645034135 |
Product | polysaccharide deacetylase |
Protein accession | YP_003191276 |
Protein GI | 258515054 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.358756 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.150786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTAGAA GAGCAGAAAT AACCATAATT TTTATAATCA TAATCACGAT TTTCAGCGCA ACTCAGAGTA ATGCACAAAC TATACAATGG TTAGCTGCTA AATACCCTGA AATAATGATA AACAGAAGTT ATTCACATGA TAAGATTGTT GCCCTGACTT TTGATGACGG GCCGGATAAT AAAATAACCC CACAGATTTT AAAAGTCTTA AAAGAAAAAA AAGTTAATGC TACCTTTTTC GTTATAGGCA TTAACGCTGC CAAGTATCCG GACATATTAA AACAGATAAG CCAGGACGGG CATGTCATTG GTAATCATAG CTGGTTTCAT GCCAGCAATT ATAACAGGGA TAGCTTAATT AATGAGATAT TGGATACGGA AAAAATCATT ACCAAGGCTA CAGGGCAAAA TATTCATCTT TTCAGACCAC CCTTTGGCAA TCTAGACGAG CAATCTTTAA TTGCTCTACA TGATTTAGGC TTTAAAATAA TCGGCTGGAG CTCAGACTCT CAGGACTGGC GCGGCATATC CAGTGAAAAA GTTACTTCTA ATATTTTTAA AGATGTTTCG CCGGGCGCCA TTATACTGCA GCATAGTTAT AATAATCCCA AGCTGATTAA TACAATAAGC GCACTGCCGG AGATAATTGA CCGGTTGCGG AGGGAAGGAT ATACTTTGGT TACTATACCG GAACTGCTTA TAAACGCAGG ACCGGTAGTA GTAAAAATCA ACCAAAAAAC CGTTAATTTT TCTGAAGCTA AATGTTCACC TAAAATAATA AATAACACCC TATACTGCCC TCTTAGGACC ACCCTTGAAA AATTAGGAGT TCAAATTTAC TGGAATGAAG AAAACAAAGC CATAACCATC ATCAAAAACA CTAATATAAT TAAGATGAGT ATCGGAAGCC AAGTTGCTTT CGTCAATAAC CGGCAGGTTT TCTTAGAGAA CCCTCCTCGA ATAGATCCTG TTTCCGGGCA AGCTCTGGTA CCTATTCGCT TTATTTGCAA CAGTATGGAT GCACTTATTG ATTTCAATAA AAATGGTTCA CATGTAGAAA TCAATATCAT ATATGACACT CAAAACATAA ATGGCATATT TTCCGGTCAA CTTGCTTAA
|
Protein sequence | MIRRAEITII FIIIITIFSA TQSNAQTIQW LAAKYPEIMI NRSYSHDKIV ALTFDDGPDN KITPQILKVL KEKKVNATFF VIGINAAKYP DILKQISQDG HVIGNHSWFH ASNYNRDSLI NEILDTEKII TKATGQNIHL FRPPFGNLDE QSLIALHDLG FKIIGWSSDS QDWRGISSEK VTSNIFKDVS PGAIILQHSY NNPKLINTIS ALPEIIDRLR REGYTLVTIP ELLINAGPVV VKINQKTVNF SEAKCSPKII NNTLYCPLRT TLEKLGVQIY WNEENKAITI IKNTNIIKMS IGSQVAFVNN RQVFLENPPR IDPVSGQALV PIRFICNSMD ALIDFNKNGS HVEINIIYDT QNINGIFSGQ LA
|
| |