Gene Dtox_1790 details

Gene Information

• Locus tag: Dtox_1790
• ID: 8428762
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum acetoxidans DSM 771
• Kingdom: Bacteria
• Replicon accession: NC_013216
• Strand: +
• Start bp: 1893542
• End bp: 1895368
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 645034125
• Product: GTP-binding protein TypA
• Protein accession: YP_003191266
• Protein GI: 258515044
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0279363
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 0.247565
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATTAAAC AGGAGAACTT AAGAAATATT GCTATAATTG CTCACGTCGA TCATGGGAAA 
ACCACACTGG TTGACAGTAT GTTAAAGCAA TCCGGTATTT TTCGGGATAA CCAGCATGTG 
GCTGAACGGA TCATGGATTC CAACGATCTG GAAAAGGAAC GGGGAATAAC CATACTGGCC 
AAAAATACTT CTGTTCGTTA TGATGAGACC AAGATAAATA TAGTCGATAC TCCCGGTCAC 
TCGGATTTCG GGGGGGAAGT TGAGCGCGTC TTGAAAATGG TAGACGGTGT GCTGCTTTTA 
GTGGATGCTT TTGAAGGACC AATGCCGCAG ACCAAGTTTG TCCTGCGCAA AGCACTGGAA 
CTTAAACTTA TGCCAATAGT AGTAATAAAT AAGATTGATC GCCCGGATGC CAGGATATAT 
GAAGTGGAAG ATGAAATTTT AGGACTGTTT ATTGATTTAG GCGCCAGCGA AGAACAGCTT 
GAATATCCGG TAATCTATAC CTCAGCCAGA GCAGGTACGG CCTCTCTTGA TTCAGAACAG 
TCCGGCACCG ACCTGAGGCC TTTGTTTGGA GCTATATTGG AGCATGTTAA GGCACCGCAG 
GGTGAAGCAG AGTCTCCGCT GCAGTTATTG GTCAATAACA CCGATTATGA CTCTTATCAG 
GGACGCATGG CTGTTGGCAG AATCAGCAGA GGTAAAATGA ACAGTGGACA GCAGGTAGCT 
TTGATAAATC ATGATGGTAA AATTACGGCA GCTAAAATAG GCAGGTTATA CGTTTATGAG 
GGCCTGGAGA GGGTAGAGGC TCTGGAAGCA GGTTGCGGTG AAATAGTGAC CTTTGCCGGT 
TTAGCGGAGG TTAATATCGG TGATACAGTG GCCTGTAAGG ATAACCCGCA GCAATTGCCG 
CCAATTACTG TCGACGAACC TACAATAAAA ATGAACTTTA TAGTTAATGA CAGTCCTTTT 
GCGGGTCAGG AGGGAAAACA CCTGACTTCA CGGGAAATTC GCGCCCGCCT GTTTAAAGAA 
ATCGAGAAAA ATGTGAGTAT GAGAGTGGAA GAGACGGCAG ACACCGATGT CTTTGTAGTG 
AGCGGCAGAG GCGAACTTCA CCTGTCTATA TTAATAGAAA ATATGCGGCG TGAAGCTTAT 
GAATTGCAGG TATCCAAACC CGAGGTAATC TATAAAAGAG AAGCAGGACA GCTTTTAGAA 
CCCATGGAAC TGTTGGTTAT TGATATTCCA GAAGATAAGA TGGGCCCGGT AATGGAGATG 
CTGGGTGTAC GCAAAGGTGA AATGATCAAT ATGATCAGCC AGAGCGGGGG ACAGCTTCGC 
TTGGAATTCA ATGTTCCGGC TCGGGGTTTG ATTGGTTTTC GTTCTCATCT ACTAACAGAA 
ACCCGCGGTC ATGCGGTGAT GAATCACACC TTTAACGGTT ACGAGCCTTT TAAGGGGGAA 
ATGCAAAGCC GCTATCAGGG AGTTTTGGTG GCGCTGGAAA CAGGAGAGGC TACAACCTAT 
GGTCTTTATT CGGCACAAGA AAGAGGCACA CTGTTTATTA CACCGGGCAC AAAAGTATAT 
GAGGGCATGA TCGTTGGTGA GAACAGCCGT GAACAGGATC TGGAAGTGAA TGTATGTAAA 
AAGAAGCATT TGACCAATAT GAGATCCAGT ACAGCTGAAA ACGCATTAAG ATTGGAAGAA 
CCCAGGCACT TTAGTTTAGA GGAAGCGCTT GAGTATTTAG ATGATAATGA GTTGCTGGAA 
ATTACGCCTT TGAGCCTGAG ACTGCGCAAA AAAATATTGG ACAAAGACAA CCGTTACAAG 
GCCAATAAAA ATTCTAAACC GGCATGA 

 

Protein sequence

MIKQENLRNI AIIAHVDHGK TTLVDSMLKQ SGIFRDNQHV AERIMDSNDL EKERGITILA 
KNTSVRYDET KINIVDTPGH SDFGGEVERV LKMVDGVLLL VDAFEGPMPQ TKFVLRKALE 
LKLMPIVVIN KIDRPDARIY EVEDEILGLF IDLGASEEQL EYPVIYTSAR AGTASLDSEQ 
SGTDLRPLFG AILEHVKAPQ GEAESPLQLL VNNTDYDSYQ GRMAVGRISR GKMNSGQQVA 
LINHDGKITA AKIGRLYVYE GLERVEALEA GCGEIVTFAG LAEVNIGDTV ACKDNPQQLP 
PITVDEPTIK MNFIVNDSPF AGQEGKHLTS REIRARLFKE IEKNVSMRVE ETADTDVFVV 
SGRGELHLSI LIENMRREAY ELQVSKPEVI YKREAGQLLE PMELLVIDIP EDKMGPVMEM 
LGVRKGEMIN MISQSGGQLR LEFNVPARGL IGFRSHLLTE TRGHAVMNHT FNGYEPFKGE 
MQSRYQGVLV ALETGEATTY GLYSAQERGT LFITPGTKVY EGMIVGENSR EQDLEVNVCK 
KKHLTNMRSS TAENALRLEE PRHFSLEEAL EYLDDNELLE ITPLSLRLRK KILDKDNRYK 
ANKNSKPA