Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1757 |
Symbol | |
ID | 8428723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1856674 |
End bp | 1857882 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645034090 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_003191237 |
Protein GI | 258515015 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000013956 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAGC AATTTCCTGA TGAAAGAGGT TATTATGGAA CTTATGGGGG CATGTTTGTG CCGGAAACTT TAATGCCGGC TCTGGAGACC CTGACCAGTG TTTACAAGGA AGCTATGCAT GATCCGGTGT TTTTAGGAGA ATTGAAATTT TATTTTAAAA ATTATGTAGG CAGACCTTCT TTGCTCTATT ATGCGCAAGG ACTGACCGAA TATCTGGGTG GAGCCAAGAT ATATTTGAAG CGAGAAGATT TGAATCATAC CGGTGCACAT AAGATCAACA ACACTATTGG CCAGGCATTA CTGGCTAAAA GAATGGGGAA ACGCAGGATT ATTGCTGAAA CCGGTGCCGG TCAGCATGGA GTGGCTACAG CTACAGCAGC AGCACTTTTA GACTTTGATT GTGTAGTATA TATGGGAGAA GAAGATACCC GCAGGCAGGC TCTAAATGTA TTCCGGATGG AATTGCTGGG GTCAAAAGTA GTTCCAGTAA AGACTGGAAG CCGTACTTTA AAAGATGCAA TGAATGAAGC AATGCGTGAT TGGGTGGCTA ATATTGAAGA TACTTATTAT GTTATCGGGT CCGTAGCAGG TCCCCACCCA TATCCTGCGA TGGTAAGGGA TTTTCAGGCT GTTATAGGCG AGGAAACCAG GGCGCAGATT ATGGAGGCGG AAGGCAGATT GCCCGATTAT GTGATAGCCT GTGTAGGCGG CGGCAGCAAT GCTATGGGTA TGTTTCATCC TTTTAAGGAA GACACGGAAG TTAAGCTCAT TGGGGTGGAG GCTGCAGGAC ACGGTACAGA AACTGATATG CATGCGGCTA CTATATCTAA AGGCATACCT GGTGTTTTAC ACGGTTCACT AAGCTATTTG CTGCAAGATG AATACGGCCA GATTGCCCCG GTGCATTCCG TATCTGCCGG TCTGGACTAT CCCGGAGTGG GTCCTGAACA CAGCTATTTG AAGGATTCAG GACGGGTGAT TTATACTAGT GCTACAGATA AAGAAGCACT GGATGCGTTT CAAATTTTGT GTCGTACAGA CGGAATTATT CCGGCCTTGG AAAGTTCCCA CGCTTTAGCT GAGGTGATTC GACTGGCACC CGGTCTTTCC GCGGATAAAG TTGTTGTGGT CAACCTGTCG GGACGTGGTG ACAAGGATGT TCAGACTGTT GCCGAGATAT TGGGTAACCT GAACCAGGCA GCAGAGTAA
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Protein sequence | MFEQFPDERG YYGTYGGMFV PETLMPALET LTSVYKEAMH DPVFLGELKF YFKNYVGRPS LLYYAQGLTE YLGGAKIYLK REDLNHTGAH KINNTIGQAL LAKRMGKRRI IAETGAGQHG VATATAAALL DFDCVVYMGE EDTRRQALNV FRMELLGSKV VPVKTGSRTL KDAMNEAMRD WVANIEDTYY VIGSVAGPHP YPAMVRDFQA VIGEETRAQI MEAEGRLPDY VIACVGGGSN AMGMFHPFKE DTEVKLIGVE AAGHGTETDM HAATISKGIP GVLHGSLSYL LQDEYGQIAP VHSVSAGLDY PGVGPEHSYL KDSGRVIYTS ATDKEALDAF QILCRTDGII PALESSHALA EVIRLAPGLS ADKVVVVNLS GRGDKDVQTV AEILGNLNQA AE
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