| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1672 |
|---|
| Symbol | |
|---|
| ID | 8428638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1749944 |
|---|
| End bp | 1750576 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645034005 |
|---|
| Product | 2,3-diketo-5-methylthio-1- phosphopentanephosphat ase |
|---|
| Protein accession | YP_003191152 |
|---|
| Protein GI | 258514930 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4359] Uncharacterized conserved protein, possibly involved in methylthioadenosine recycling |
|---|
| TIGRFAM ID | [TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
[TIGR01489] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.401713 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGAA ACTTTTTTAT AGATTTTGAC GGCACGATCA CAGAGCAGGA TGTAGTCTTT
ACCATGATTA AAACTTTCTG CCGCGAAGGC TGGCAGGAAA TAAACGGCCG GTGGGAGCGA
GGCGAGATCA GTACAGAACA ATGTGCACAG AAGACGTTCA ATCTGATGTC GGCCGGCCGG
GAAGATATTT TAAACCTGGC CTCAGCTATA AAAATTGACC CGTATTTTCC GGAGTTTCTC
AGGCTTTGCC GGCAAAACAA AGAAAATGTG GTTATTCTCA GTGACGGCTA TGATTTAATA
ATCGCGCATA TATTGAAAAA GGCCGGAATT GAGCTGCCTT TCTATGCCAA CAGGCTGCTT
GTGGAGGGCA ACCGTTTTTC CATTGCCTGT ACTCATCATA ACAAAGACTG CGGCAGGTGC
GGCACCTGTA AAACAGGTCT TCTGCACAGG CTAAAGGAGA AAAACAGCCG CACCGTGTTT
GTGGGAGACG GTTATTCTGA CACCTGTGTA GCCAGAGAAG CAGATATTAT CCTGGCTAAG
GAGCCGCTAT TGGGCTACTG CCTGAATAAC GATATTCCGG CTTTGCCTAT AAATAATTTT
TCGGATGTTA TAAAGCTGTT GCCTGAATTG TAG
|
|---|
| Protein sequence | MSRNFFIDFD GTITEQDVVF TMIKTFCREG WQEINGRWER GEISTEQCAQ KTFNLMSAGR
EDILNLASAI KIDPYFPEFL RLCRQNKENV VILSDGYDLI IAHILKKAGI ELPFYANRLL
VEGNRFSIAC THHNKDCGRC GTCKTGLLHR LKEKNSRTVF VGDGYSDTCV AREADIILAK
EPLLGYCLNN DIPALPINNF SDVIKLLPEL
|
|---|
| |