Gene Dtox_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1624 
Symbol 
ID8428590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1705295 
End bp1705948 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content38% 
IMG OID645033957 
ProductRNA-directed DNA polymerase 
Protein accessionYP_003191104 
Protein GI258514882 
COG category[L] Replication, recombination and repair 
COG ID[COG3344] Retron-type reverse transcriptase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.775182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAACAA AATTGGCAAA GATAGCTGAC GTTGCTAAAG CTAAGCCAAA AGAACAATTC 
ACGTCTTTGG CGCATCTTAT TAATGAGGAA TTGCTGGAGA TTTGCCATCA TGAGATGGAT
CCAAACAAGG CATCTGGTAT TGACCGAGTT ATGAAGGAGA AATATGGAGA GAGTTTATCA
AATAAACTTC AAGACTTGGT AGTACAAATG AAGCAACATT CGTATCATCC ACAGCCAGTA
AAGCGAGTCT ATATACCTAA AACTGGAACA AAGGAGCTGA GGCCTCTAGG GATACCCGCT
TATGAAGACA AATTAGTACA AGCTGCACTT AGCAAAATAC TTAATGCTAT ATACGAAGCG
GATTTTATGG AGTGCTCCTT TGGATTTCGA CCAAATCGTG GATGTCACGA TGCATTAAAA
GTACTCAATC ACATAATTGA AAAGAGCAAG ATTAACTATA TTGTAGATGC GGATATTAAA
GGATTCTTTA ATCACGTGGA TCACCAGTGT TTATTGAAGT TCATAGGACA TCGCATTAAA
GATCCCAATA TACACCATCT AATTATACGA CTTCTAAAAT CGGGAGTTAT GTATAAAGGA
GAATTCTCTG ATACAACGGA AGGAACTCCA CAAGGTGGAT TATGCAAAGC TTAG
 
Protein sequence
MITKLAKIAD VAKAKPKEQF TSLAHLINEE LLEICHHEMD PNKASGIDRV MKEKYGESLS 
NKLQDLVVQM KQHSYHPQPV KRVYIPKTGT KELRPLGIPA YEDKLVQAAL SKILNAIYEA
DFMECSFGFR PNRGCHDALK VLNHIIEKSK INYIVDADIK GFFNHVDHQC LLKFIGHRIK
DPNIHHLIIR LLKSGVMYKG EFSDTTEGTP QGGLCKA