Gene Dtox_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1587 
Symbol 
ID8428551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1664781 
End bp1666064 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content36% 
IMG OID645033920 
ProductABC transporter related 
Protein accessionYP_003191069 
Protein GI258514847 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACC CCATTATTAA GGTTCATAAG ATATCTAAAT GTTACCGTAT AGGGATTAAC 
AGAAATGAAT GTAAAACATT CCGCGAGGCT ATAATGCAGG GTATTAGCGC ACCGGTTAGA
AATTTAGCTA AGCTGCGCGG ACTAACTAAA TTCACCGGTG AAGAATTGGT AAACGGCAGT
AAAGATATAA TCTGGTCTCT CAAAAATGTA TCCTTTGAAG TAAACAAAGG TGATGTACTG
GGCATTGTCG GCAACAACGG GGCCGGCAAG AGTACACTGT TAAAAATATT GTCAAGGGTT
ACTGATCCTA CTGGCGGTTA TGTTGAAATT AACGGCAGGC TTTCCTGCCT GCTGGAGGTA
GGCACTGGAT TTCATCCCGA ACTTACGGGA AGAGAGAATA TTTTTCTCAG TGGTGCCGTC
CTGGGCATGA GTAAGCAGGA AATTAAAAAT AAATTTGATG AGATTGTTAA TTTCGCAGAA
ATAGAGAAAT TTATAGACAC ACCTGTTAAA AGGTATTCCA GTGGAATGTA TGTAAGGCTG
GCCTTTGCGG TAGCGGTACA CCTTGAGCCG GATATATTGA TTATTGATGA AGTCCTGGCT
GTTGGAGATA TTGCATTTCA GAAAAAATGT CTTAGGAAAA TAAAATCTTT TGCCAGAAAA
GGGCAAACAA TTTTATTCGT AAGCCATAAC ACCGATATGG TTAAAAGTTT ATGCGACAAC
GCTTTATGGC TAAAAGATGG CCATTTAGTA AAAATCGGTT CTGTAAATGA AGTTATTAGA
GATTATGAGG AACAGCACAT AAATTTTTTA AATATATCTT CCAGTATTAT AGAAAGAAAC
CCTTTGGATT ATAAGGAATT AAATTTTTAT ATAAGTCGTG TCGAAATATT AAATATAAAA
AATGAGCATA CCACCATATT TAGATATAAT GAAAAAATAA TTTTATTAGT AGATATTGGA
GGGGAGCCTT TATCAAACAA ATACAGTATA GAATTTAGAA TATACAATGA AACCGGAGAT
TTTGTTGCTC TGGGTTCATC CGGGTTATTT CACGGAATTT TTTTTGAGAA AAAAATTAAG
AAAGTAAGAA TAGAAATCGG TCCCCTGACT CTCACAAAGG GTAAATATGC CATCTCGTTG
AGTGCAATGG GCATGCTTGG AGGGGATACC TGGGATAACA CGTGTTTATT TCAAATTGTT
GAATGCTATC CGTTTTCTGC ACACTTTGAC ATAGATAACA GGTCAATTTG TGTTCTTCAG
CAATCCTTTA ATGCTATGAG ATAA
 
Protein sequence
MANPIIKVHK ISKCYRIGIN RNECKTFREA IMQGISAPVR NLAKLRGLTK FTGEELVNGS 
KDIIWSLKNV SFEVNKGDVL GIVGNNGAGK STLLKILSRV TDPTGGYVEI NGRLSCLLEV
GTGFHPELTG RENIFLSGAV LGMSKQEIKN KFDEIVNFAE IEKFIDTPVK RYSSGMYVRL
AFAVAVHLEP DILIIDEVLA VGDIAFQKKC LRKIKSFARK GQTILFVSHN TDMVKSLCDN
ALWLKDGHLV KIGSVNEVIR DYEEQHINFL NISSSIIERN PLDYKELNFY ISRVEILNIK
NEHTTIFRYN EKIILLVDIG GEPLSNKYSI EFRIYNETGD FVALGSSGLF HGIFFEKKIK
KVRIEIGPLT LTKGKYAISL SAMGMLGGDT WDNTCLFQIV ECYPFSAHFD IDNRSICVLQ
QSFNAMR