Gene Dtox_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1584 
Symbol 
ID8428548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1662778 
End bp1663518 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content38% 
IMG OID645033917 
Productputative RNA polymerase sigma factor SigI 
Protein accessionYP_003191066 
Protein GI258514844 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02895] RNA polymerase sigma-I factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGCAGC ATAACTTAGA AGAAACCTTG AAGTTGGCTA AAAAGGGGGA TCTAGGCAAA 
CGCGAGGAAT TGATTCGAAA CCACAAAAAT TTTATAGCAA AAGTTAGTTC TAAGATATGT
AACAGGTACT TAATCTGGAA CAACGATGAT GAATTAAGCA TTGCATTTCT TGCGTTTAAT
GAAGCTATAG ATAACTTTAA GCCAAGTGAA GGAACTGCGT TTCATAGTTT TGCCCAGAGG
ATAATAAGGA ACCGGCTAAT AGATTATTTT CGTAAAGAAT CTAAACACAT GCATATATCC
CTATCACCAA TGGACTCTTC AGATGAAGAA CTGCGCCGGT ATGATGAAGA ATATTCCTAT
GAGCAATACC AAGAGGTGGA GAAACAGGCT GTTCTAGCAG AGGTTGTTGA GAGTTATATT
AAAGTGTTGT GGGAATATGG GGTAACATTA GACGATTTGG TCAAGGTTTC TCCGAGGCAC
AAGAATCGTA AGGAGACATT GATGATGGTT GCATTGAAAT TAATAAATGA ACCTTCTCTT
TTGGAATACT TGAAAAAATA TAAGCGTTTA CCTGTAAAAG AACTGAAGCT TTTTACCGGG
GTAAATCGCA GAATTTTAGA TGGCGGCAGA AAATATCTGA TTGCCCTTGC CTTAATCTTA
TCTGAACCGA GGTTTTATCC TTTGAAAAGC CTTACCGAGA TACCATGTGC AAGTATTGGA
GAGAAGGTGT CACGGCAATG A
 
Protein sequence
MLQHNLEETL KLAKKGDLGK REELIRNHKN FIAKVSSKIC NRYLIWNNDD ELSIAFLAFN 
EAIDNFKPSE GTAFHSFAQR IIRNRLIDYF RKESKHMHIS LSPMDSSDEE LRRYDEEYSY
EQYQEVEKQA VLAEVVESYI KVLWEYGVTL DDLVKVSPRH KNRKETLMMV ALKLINEPSL
LEYLKKYKRL PVKELKLFTG VNRRILDGGR KYLIALALIL SEPRFYPLKS LTEIPCASIG
EKVSRQ