Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1572 |
Symbol | |
ID | 8428536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1645792 |
End bp | 1646511 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645033906 |
Product | ABC transporter related |
Protein accession | YP_003191055 |
Protein GI | 258514833 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.633552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTAGTG TAAAAGGATT AAACAAAATA TACCGGGCCG GTGTAAACTC TATACATGCC TTGCGGGACA TATCTGCAGA AGTGGAAAAA GGTGAATTTG TGGCGGTTAT GGGCCCGTCA GGATCAGGCA AGTCCACCTT TATGAACCTG TTGGGCTGTC TGGATACTCC CAGCAGCGGC TCATATTTGC TGGACGGGGT GGAAATCAGC GGGCTGGATG ACGGGGAACT GGCTGACATT CGTAATCAAA AAATCGGATT TGTTTTTCAG ACCTTCAACC TGCTTCCCCG AATGACGGCC CTGCGCAATG TTGAATTACC CATGCTATAC GCAGGAGTAG AACCGCGACT GCGCAGGGAA AGAGCAATTA CTGCGCTGGA AAGAGTCGGC CTGGCTGACC GCTTGCACCA TAAACCCAAT GAACTTTCGG GAGGACAAAA CCAGAGAGTG GCCATTGCCC GTTCACTGGT TAACCGGCCC GCGATAATTC TGGCTGATGA ACCAACCGGT GCTCTGGATA CCAGGTCAGG TGAGGAAATA ATGGCTATCT TTCAGGAGTT AAACCGGGAA GGCTCCACTA TAGTGCTTGT AACCCATGAA CCGGACATTG CCCGGCATAC CCAAAGGGTT ATACATTTCC GGGATGGGAA ACTGGTTAAG GATGAGAAAG TTGAGCAATC GCTTGATGCA AAGGAACTTT TAGACGGGTT GCAGTTATAG
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Protein sequence | MISVKGLNKI YRAGVNSIHA LRDISAEVEK GEFVAVMGPS GSGKSTFMNL LGCLDTPSSG SYLLDGVEIS GLDDGELADI RNQKIGFVFQ TFNLLPRMTA LRNVELPMLY AGVEPRLRRE RAITALERVG LADRLHHKPN ELSGGQNQRV AIARSLVNRP AIILADEPTG ALDTRSGEEI MAIFQELNRE GSTIVLVTHE PDIARHTQRV IHFRDGKLVK DEKVEQSLDA KELLDGLQL
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