Gene Dtox_1572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1572 
Symbol 
ID8428536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1645792 
End bp1646511 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content50% 
IMG OID645033906 
ProductABC transporter related 
Protein accessionYP_003191055 
Protein GI258514833 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.633552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAGTG TAAAAGGATT AAACAAAATA TACCGGGCCG GTGTAAACTC TATACATGCC 
TTGCGGGACA TATCTGCAGA AGTGGAAAAA GGTGAATTTG TGGCGGTTAT GGGCCCGTCA
GGATCAGGCA AGTCCACCTT TATGAACCTG TTGGGCTGTC TGGATACTCC CAGCAGCGGC
TCATATTTGC TGGACGGGGT GGAAATCAGC GGGCTGGATG ACGGGGAACT GGCTGACATT
CGTAATCAAA AAATCGGATT TGTTTTTCAG ACCTTCAACC TGCTTCCCCG AATGACGGCC
CTGCGCAATG TTGAATTACC CATGCTATAC GCAGGAGTAG AACCGCGACT GCGCAGGGAA
AGAGCAATTA CTGCGCTGGA AAGAGTCGGC CTGGCTGACC GCTTGCACCA TAAACCCAAT
GAACTTTCGG GAGGACAAAA CCAGAGAGTG GCCATTGCCC GTTCACTGGT TAACCGGCCC
GCGATAATTC TGGCTGATGA ACCAACCGGT GCTCTGGATA CCAGGTCAGG TGAGGAAATA
ATGGCTATCT TTCAGGAGTT AAACCGGGAA GGCTCCACTA TAGTGCTTGT AACCCATGAA
CCGGACATTG CCCGGCATAC CCAAAGGGTT ATACATTTCC GGGATGGGAA ACTGGTTAAG
GATGAGAAAG TTGAGCAATC GCTTGATGCA AAGGAACTTT TAGACGGGTT GCAGTTATAG
 
Protein sequence
MISVKGLNKI YRAGVNSIHA LRDISAEVEK GEFVAVMGPS GSGKSTFMNL LGCLDTPSSG 
SYLLDGVEIS GLDDGELADI RNQKIGFVFQ TFNLLPRMTA LRNVELPMLY AGVEPRLRRE
RAITALERVG LADRLHHKPN ELSGGQNQRV AIARSLVNRP AIILADEPTG ALDTRSGEEI
MAIFQELNRE GSTIVLVTHE PDIARHTQRV IHFRDGKLVK DEKVEQSLDA KELLDGLQL