| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1435 |
|---|
| Symbol | |
|---|
| ID | 8428390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 1488367 |
|---|
| End bp | 1489338 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 645033771 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003190929 |
|---|
| Protein GI | 258514707 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACT ATGAGTATCA AAGCCAATTG GCCCCATATA TTTCGGGCTT GATCCGGCAA
AAACGGGCTG ATGGCTATAG CTACGAATTT GAAGCGTATA TGCTGGAACG CTTTGATCGA
TTCTGTATCG AAAACGGATA TGATAATGGC AGCCTGACAA GAGAGCTGGT GATGGCCTGG
GCTGAGCAAA GGCCATCGGA AAGTAAAAAT TATCGCAATC AGAGGGTTTC TTTCGTCAGG
CAATTAGCTC TGTATGTGAT TTCTTTAAAT ATGGAGGCCT ACATTCCCCG CGCTTTCGAG
TCAAACGAAA TTTCAGTCCC GCATATTCTA TCATTCGATG AAGTACATGA GTTTTACAAA
GCTGTTGACA ACTTCCTACC TTGCCAGCCA AATTTTCGGC GTTTCTCATT ATCATACAGT
GTGTTGTTCA GGCTGTTCTA CTGCTGTGGG TTACGATTGT CCGAAGGCTG TTATCTAAAA
AGATCCACAG TCAACCTCGA AAATGGCTGT CTTTCCATCT ACCAGTCAAA GGGGCATAAG
GACCGTGTGG TTTTCATGTC TGGAGACATG CTGCAAATGT GTAGGAACTA TGACAGGCTC
ATGCAGAAAT TGTTGCCTGA CAGGGATTGG TTCTTCCCGG GGCGGGATGA ATTTAAACCA
TTTTCGAAAA CAAGCATTGA TAAAAAGTTT AGCGAATTGT GGAATATGAC TCCTTATGCG
GGAAAGGTTG ATAAAAAACC TACAGTTCAT TCCCTCCGGC ATACATATGT GGTAACAAAA
ATGAATGACT GGATGAAAGA AGGCAAGGAT TTCGAAGCCA TGATGCCTTA TTTGAGCCGA
TATCTTGGAC ATGCCTCAAT TGATGAAACA CAGTATTATT ATCATCTGGT TGTATTCGCA
TTTGAAATAG TCAGAAAGCA CGACAGTGTT GCTAAAAGGG TTATCCCCGA GGTGGTCCCC
CATGAAGAAT AG
|
|---|
| Protein sequence | MKNYEYQSQL APYISGLIRQ KRADGYSYEF EAYMLERFDR FCIENGYDNG SLTRELVMAW
AEQRPSESKN YRNQRVSFVR QLALYVISLN MEAYIPRAFE SNEISVPHIL SFDEVHEFYK
AVDNFLPCQP NFRRFSLSYS VLFRLFYCCG LRLSEGCYLK RSTVNLENGC LSIYQSKGHK
DRVVFMSGDM LQMCRNYDRL MQKLLPDRDW FFPGRDEFKP FSKTSIDKKF SELWNMTPYA
GKVDKKPTVH SLRHTYVVTK MNDWMKEGKD FEAMMPYLSR YLGHASIDET QYYYHLVVFA
FEIVRKHDSV AKRVIPEVVP HEE
|
|---|
| |