Gene Dtox_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1415 
Symbol 
ID8428367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1446021 
End bp1446971 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content40% 
IMG OID645033752 
Productintegrase family protein 
Protein accessionYP_003190913 
Protein GI258514691 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGA GTTCAGGCAG AAGTGGTAAT TCCGGAGCAA CAGATGGGAT ATATCAAACC 
CTGTTAATAC AATTTGACAA AGTTTTCAAC TCTGCAAGGA AAGATTACCC TGGGGCAAAG
AGTTCTATCT ACAGATGTAA GAGTAGTATG CGCCAGTTTC TGTTTTTTTG TGCTAATAAT
TATAGGATGC AAAACATCCG TAATATACAG GACAAGCACA TTAAAGATTT TATCGAGTAC
CGGCGAGATC AGGGAATAAA TGAAAAGGTA ATAAAAAATG ATATTTGGGC TGTTCGGTTA
TTTCACCGCT ATACCCCGAA AGCAAAAAAT AGAATATCCG ATAACGAAGT TTTCGGATTA
AAGTCAACCC CGGACGGTAG AGTTGACCGG GCATGGACGG AGGGAGAGTT TAAAAAAATG
CTTGATTTTG CAGAAAAGTT GGGAAGGCAA GATGTAGCCT TTACCATGCG TTTAGCGCAA
CATGCCGGAT TGAGAATACA TGAATGTTTA CGTTTAAGTA AAGAGGATGC AGAGGCAGCT
CTCAGAACAG GGATACTGCA TGTTAAAGGA AAGGGTGGAC GCGAAAGAGA TTTAAAGTTA
TCCTCTGAAG CGTTACAGGC TTTGAGTGAA GCTTCGGTTC GAATTAATAA TGATGCAGGT
AAGCTTTTCG TTCGCCCAGG ACAAAAAACT CATAGTGCTA AAAAATCTAT AGAGGGGTTT
ATTAGCAAGC ATAGGGATAA GTTTAGGGAG TTGGAAGATC GGGAAAAGAA TATGACATTT
CATGGGCTCC GGCATACATT TGCAAGGAAG GAGTATTTTC AGAGAATTGA TAGAGGGATG
GATATACAAC GGGCGTTAGT TGAAGTATCA CGGATTTTAG GCCATAATCG TCCGGAAGTT
ACTAAGATTT ATTTAGGGAC ATCTCATTTA AATTTCAACT ATGTTAAGTA A
 
Protein sequence
MARSSGRSGN SGATDGIYQT LLIQFDKVFN SARKDYPGAK SSIYRCKSSM RQFLFFCANN 
YRMQNIRNIQ DKHIKDFIEY RRDQGINEKV IKNDIWAVRL FHRYTPKAKN RISDNEVFGL
KSTPDGRVDR AWTEGEFKKM LDFAEKLGRQ DVAFTMRLAQ HAGLRIHECL RLSKEDAEAA
LRTGILHVKG KGGRERDLKL SSEALQALSE ASVRINNDAG KLFVRPGQKT HSAKKSIEGF
ISKHRDKFRE LEDREKNMTF HGLRHTFARK EYFQRIDRGM DIQRALVEVS RILGHNRPEV
TKIYLGTSHL NFNYVK