| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1385 |
|---|
| Symbol | |
|---|
| ID | 8428334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1418598 |
|---|
| End bp | 1419902 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 645033720 |
|---|
| Product | Phenylacetate--CoA ligase |
|---|
| Protein accession | YP_003190884 |
|---|
| Protein GI | 258514662 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00741433 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATT GGGATCAAAA AAACGAGACA ATGTCCGGGG AAGAGCTGGC GGCCCTTCAA
TTGGAAAGGT TAAAGAACCT GGCAGTCAGG CTGTATGAGA ATGTTCCTTT TTACAAACAG
TCTTTTGATC AGACTGGCAT AAAACCGGCC GATATCAAAT CTATGGAAGA TTTAAAATAC
CTGCCTTTTA CCACTAAGCA GGATTTGCGC GATAATTACC CCTTTGGCAT GTTTGCTGTT
CCTATGCAGG ACGTTGTAAG AGTACATGCA TCCTCAGGGA CAACAGGCAA ACCTACCGTT
GTCGGTTACA CAAAAAATGA TCTAACCATC TGGGCGGATT TGGTGGCACG GGCTTTAACC
ATGGCAGGAG CTACCAGGAC AGACCTGGTG CAGAATGCTT ATGGCTATGG ATTTTTTACC
GGGGGACTGG GCGTACATTA CGGTACTGAG CGTATCGGGG CCACTATAGT TCCTATTTCA
GGCGGCAATA GCTCCAGACA GCTCATGATT ATGCAGGATT TTAAAACTAC CATCTTGACC
TGTACACCAA GCTATGCACT GCACCTGGCA GAGGCTGCCT GTGAAGCCGG TATTGATTTA
AAAACTCTGC CCCTGAAAGC CGGTGTTTTC GGTGCGGAAC CCTGGACAAA TCAGATGCGC
AACCAATTGG AGGAATTATA TGGTATTATG GCTCTGGATA TTTATGGATT AAGTGAAGTG
CTGGGACCGG GAGTGGGCTG TGAATGTGCT GTGAAAGATG GCCTGCATAT TTTTGAAGAT
CACTTCATTG TAGAAATCGT AGATCCGGAA ACAGGAAAGC AAGTGCCTGA CGGGGAAAGG
GGTGAGTTGG TATTTACCAC TTTGACCAAA GAGGCCCTGC CCATTATTCG CTACCGCACT
AGGGATATTT CTGTGATTAG ACGCGAACAA TGCGCCTGTG GCCGTACACA TGCCCGTATT
GAGAGAATCA CCGGCCGGAC TGATGATATG CTGATTATCA GAGGTGTTAA TGTGTTTCCT
TCTCAAATTG AAAGCGTTCT GCTTGAATTT GGGGAAACAG AGCCTCATTA TCAATTGGTA
GTGGACAGAA AAGGCAGTCT GGATAATCTG GAGGTGTGGG TCGAACTTTC CAGCAGCATG
TTCTCAGACA GGGTAAGATT TTTGGAAGAT TTAGAACACA GGCTGAGACA TAAAATTTTA
TCTGTATTGG GTATTTCCGC CCGCATCAAG CTGGTAGAGC CTCATACAAT ACCCAGAAGT
GAAGGTAAGG CTAAGCGTAT AGTAGACCGC AGAGAGCTTT CTTAG
|
|---|
| Protein sequence | MKYWDQKNET MSGEELAALQ LERLKNLAVR LYENVPFYKQ SFDQTGIKPA DIKSMEDLKY
LPFTTKQDLR DNYPFGMFAV PMQDVVRVHA SSGTTGKPTV VGYTKNDLTI WADLVARALT
MAGATRTDLV QNAYGYGFFT GGLGVHYGTE RIGATIVPIS GGNSSRQLMI MQDFKTTILT
CTPSYALHLA EAACEAGIDL KTLPLKAGVF GAEPWTNQMR NQLEELYGIM ALDIYGLSEV
LGPGVGCECA VKDGLHIFED HFIVEIVDPE TGKQVPDGER GELVFTTLTK EALPIIRYRT
RDISVIRREQ CACGRTHARI ERITGRTDDM LIIRGVNVFP SQIESVLLEF GETEPHYQLV
VDRKGSLDNL EVWVELSSSM FSDRVRFLED LEHRLRHKIL SVLGISARIK LVEPHTIPRS
EGKAKRIVDR RELS
|
|---|
| |