Gene Dtox_1373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1373 
Symbol 
ID8428322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1404703 
End bp1405167 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content47% 
IMG OID645033708 
ProductRibonuclease H 
Protein accessionYP_003190872 
Protein GI258514650 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000016883 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000157044 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCAGG TAGAGATATA TACTGACGGT GCCTGCAGCG GCAATCCCGG TCCCGGAGGC 
TATGGTGTAG TTTTAAAATA CGGGGATAAG ATAAAAGAAC TGTCTGCCGC TTACCGGAAA
ACGACTAATA ACCGGATGGA GATATTAGCT GCCATTATTG GTCTGGAGGC TTTAAGGAGA
CCTTGCACGG TTACACTCTA TAGTGACAGC CAGTATCTGG TCAATGCCAT GACCAAGGGC
TGGGTTAAAC GCTGGAAGGC TAATAACTGG ATGCGCAACA AACAGGAGGC TGCAAAAAAT
ATTGATCTAT GGGAGAGAAT GCTGCCCTTG CTGGAGCAGC ACCAGGTTGA TTGGGTCTGG
GTGAAGGGTC ATGCAGATAA CTACTACAAC AACCGCTGTG ATTTTTTAGC TGTCAGGGCA
ATTAAGGAAC AGGCGCTTTT AGAGGATGAA GGTTTTAAAA AATAG
 
Protein sequence
MSQVEIYTDG ACSGNPGPGG YGVVLKYGDK IKELSAAYRK TTNNRMEILA AIIGLEALRR 
PCTVTLYSDS QYLVNAMTKG WVKRWKANNW MRNKQEAAKN IDLWERMLPL LEQHQVDWVW
VKGHADNYYN NRCDFLAVRA IKEQALLEDE GFKK