Gene Dtox_1359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1359 
Symbol 
ID8428308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1391043 
End bp1391552 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content34% 
IMG OID645033694 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003190858 
Protein GI258514636 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000613584 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.129885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATGCTG AATTTTCTAC TTTATATCAG AAATATAAAG GACCTATATT CGCTTATATT 
TTTTATCTTG CCGGAGATAG GGCGGTAGCT GAGGAAATAT GCCAGGATGT TTTTTTAAAG
GTATACTTAA ACATTGCCAA ATTTGAGAGC AGGTCCAGCT TTAAGACGTG GATTTATAAA
ATAGCAAAGA ATACATATCT TGGCCATGTT CGAACCCGAA AAAAAGAATT GGCAATTGAC
AACATAGAAA TTTTTGCTAA TGAATTAGAA GACAGGGGTA TGGGCCCCGA AGAACATGCT
GTTAATAGTG CAACTAAGAA GCTTATAGAA AAGACATTAA ATAAAATGAA TGAAAAATAT
CGAATACTTT TAATTCTGCG GGATATTCAG AATTTATCCT ATAAGGAAAT AAGCGGTATT
ACAGAAATGG AGTTAAACGC CGTTAAGACT GGAATTTTTA GAGCGAGAAA AGAGTTTCAG
AGAATTTATA AGGAAATGGA GGATCTCTAA
 
Protein sequence
MNAEFSTLYQ KYKGPIFAYI FYLAGDRAVA EEICQDVFLK VYLNIAKFES RSSFKTWIYK 
IAKNTYLGHV RTRKKELAID NIEIFANELE DRGMGPEEHA VNSATKKLIE KTLNKMNEKY
RILLILRDIQ NLSYKEISGI TEMELNAVKT GIFRARKEFQ RIYKEMEDL