Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1359 |
Symbol | |
ID | 8428308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1391043 |
End bp | 1391552 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 645033694 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003190858 |
Protein GI | 258514636 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000613584 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.129885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAATGCTG AATTTTCTAC TTTATATCAG AAATATAAAG GACCTATATT CGCTTATATT TTTTATCTTG CCGGAGATAG GGCGGTAGCT GAGGAAATAT GCCAGGATGT TTTTTTAAAG GTATACTTAA ACATTGCCAA ATTTGAGAGC AGGTCCAGCT TTAAGACGTG GATTTATAAA ATAGCAAAGA ATACATATCT TGGCCATGTT CGAACCCGAA AAAAAGAATT GGCAATTGAC AACATAGAAA TTTTTGCTAA TGAATTAGAA GACAGGGGTA TGGGCCCCGA AGAACATGCT GTTAATAGTG CAACTAAGAA GCTTATAGAA AAGACATTAA ATAAAATGAA TGAAAAATAT CGAATACTTT TAATTCTGCG GGATATTCAG AATTTATCCT ATAAGGAAAT AAGCGGTATT ACAGAAATGG AGTTAAACGC CGTTAAGACT GGAATTTTTA GAGCGAGAAA AGAGTTTCAG AGAATTTATA AGGAAATGGA GGATCTCTAA
|
Protein sequence | MNAEFSTLYQ KYKGPIFAYI FYLAGDRAVA EEICQDVFLK VYLNIAKFES RSSFKTWIYK IAKNTYLGHV RTRKKELAID NIEIFANELE DRGMGPEEHA VNSATKKLIE KTLNKMNEKY RILLILRDIQ NLSYKEISGI TEMELNAVKT GIFRARKEFQ RIYKEMEDL
|
| |