Gene Dtox_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1337 
Symbol 
ID8428286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1364163 
End bp1366247 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content33% 
IMG OID645033673 
Producthistidine kinase 
Protein accessionYP_003190837 
Protein GI258514615 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.193338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATACAA AGTTGAAAAA TTATAGCCAT TTGATAACAA CGAAAACTAT TGTTTTTATC 
CTGGTAATCC TATGTTTTAC CGGATTTATT ACAGCATTTG TGAATATAGC AGTACTAAAT
GATGGTGACT TTGGTATCGT TTATGAAGAT AACTACTATC TTAGCAGGTC ATATATGCGG
GAAAGTGAGA ATATCTTGAA TGATCTAACA AGACTAATAG GCGAGTATAA GAATGAAGAA
CAGATATTAA ATGGCGGGAC TGTTACTGAA GATGAAATGA GAAGAGAAGA AGAAAAACTA
TTTTCAGAAT TTCAATATAA TTTCAGAAGT TATAATCCAA ACTTAAATGA GGAGGAAAAC
TATAAAAAAT TTAAAGAAGT ATATGCAGAT AAACTCACTC AAGCAAGGGA TAGGGTGATC
AAGAATGATT TAAGGGAATA TAATTTACTG CTGCAAAGAT TAAAAGAGCA CAAGGGTGTT
TTATATTATG CCAGTAATGG TGTAAATGTA TATACCAATA GTACTGAGCT AAAAAAAGAG
CATTTTAAAA GCTATCCTTC TTTTATTATA TTTGATAAGT ATGAAAAAGA GTTTTATCCA
ACGGAATTAA AAGATAATCA GTATTTATAT CAATTCACAA ATATTGTTAA TGATTTTGAC
CCGGCAAGCA ATGTTATTTA CATTGCTTAT ACGAAAGAGT TTTTAGATCC GAGTATAAAG
GAATGGAAGG AAGACAAGGT AACAGCTACT AATAGTTTAT ATAGATTAGC GGGATTTTTA
CTGGGATTAG CACTGTCATT TGTATATCTG ATTCTCGTTG TAGGGAGAAA ATCATTTAAG
GATCAAGAGG TACAATTAAA CGTAGCAGAT AGATTATATA ATGACATTAA TTTATTGTTG
TGTATAGGAC TTATAATACT GTGGGTTGGA TTGTTGAGTG CGGTAAATTC TCAAAACATC
CATAGAATGA TAATTCCAGT AACTATCCCT GTTGCTGCAG TAGGATTAGT GCTTGTTCTT
TCACTGGTAA GGCATTTTAA AAATAAAACG ATTATAAAGC ATACCTTGGT CTATAGCATT
CTATATAAGG TGTTCAAATT TGCAAGAGAT GTATATGACA GCGGAAGCGT TGGCGTAAAG
ATAGTATTAA TTGTAGTCGC ATATCCGGCA TTGGTTGCTA TGACGTTTTT TATGTTCCCG
GTAACCCTGG GCATTGCTGC TTGGTTTGCC TTTAAGCAGA TCAAGTCATT TAATGCAATC
AAAGAAGGAG TGGAGAGAAT AAAAGGTGGA GATATTCATC ATACCATAGA TGTAGATGGC
AGTGGAGAGT TTAGAAGACT TGCTGCTAAT ATAAACAGTA TCACACAAGG TTTAAAAAGC
GCAGTCCATA ACGAACTCAA AAGTGAGCGG TTAAAAACGG AGCTGATCAC AAATGTGTCT
CATGATATAA GAACACCATT GACCTCCATT ATTACCTATG TAGATTTATT GAAAAAGGAA
AAGAACCCAT CAAAGGTGGA GAAATATATA GAAGTACTTG ATCAAAAATC ACAAAGGTTA
AAAATACTTA CAGATGATTT ATTTGAAGCG GCAAAGGCCT CCAGTGGGAA TATTCCGGTA
AATCTTGAGC GAATAGATAT TGTATCTCTA CTAAACCAGG GTTTAGGTGA ACTTAATGAT
AAAATTGAAG TCTTAGATTT AGAATTTAAG ATAAACTATC CTCAAAAAAA TATATATATT
TCAGCCGATG GAAAGTTATT ATGGAGATCT ATAGAGAACT TAATATCCAA TATATTTAAA
TATGCCCTTA AAGGGTCGAG AGTATATATA GATATCGAAG ATTTAGGCAA CGAAATACTG
CTCACCATTA AAAACATATC AGCTTATGAG TTAAATATCT CGGCAGATGA ATTAATGGAG
CGTTTCAAAA GAGGTGATGA ATCCAGAAGC AGTCAAGGCA GTGGACTGGG ACTATCGATT
GCGAAAAGCT TGATTGATAT TCAGGGTGGA AAATTTGATG TACAAGTAGA CGGAGATTTA
TTTAAGGCTA TGATCTATAT GCCTATACGA AAAAGTAATG AGTGA
 
Protein sequence
MDTKLKNYSH LITTKTIVFI LVILCFTGFI TAFVNIAVLN DGDFGIVYED NYYLSRSYMR 
ESENILNDLT RLIGEYKNEE QILNGGTVTE DEMRREEEKL FSEFQYNFRS YNPNLNEEEN
YKKFKEVYAD KLTQARDRVI KNDLREYNLL LQRLKEHKGV LYYASNGVNV YTNSTELKKE
HFKSYPSFII FDKYEKEFYP TELKDNQYLY QFTNIVNDFD PASNVIYIAY TKEFLDPSIK
EWKEDKVTAT NSLYRLAGFL LGLALSFVYL ILVVGRKSFK DQEVQLNVAD RLYNDINLLL
CIGLIILWVG LLSAVNSQNI HRMIIPVTIP VAAVGLVLVL SLVRHFKNKT IIKHTLVYSI
LYKVFKFARD VYDSGSVGVK IVLIVVAYPA LVAMTFFMFP VTLGIAAWFA FKQIKSFNAI
KEGVERIKGG DIHHTIDVDG SGEFRRLAAN INSITQGLKS AVHNELKSER LKTELITNVS
HDIRTPLTSI ITYVDLLKKE KNPSKVEKYI EVLDQKSQRL KILTDDLFEA AKASSGNIPV
NLERIDIVSL LNQGLGELND KIEVLDLEFK INYPQKNIYI SADGKLLWRS IENLISNIFK
YALKGSRVYI DIEDLGNEIL LTIKNISAYE LNISADELME RFKRGDESRS SQGSGLGLSI
AKSLIDIQGG KFDVQVDGDL FKAMIYMPIR KSNE