Gene Dtox_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1336 
Symbol 
ID8428285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1363502 
End bp1364188 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content35% 
IMG OID645033672 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003190836 
Protein GI258514614 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0802102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATAC TGGTCTGTGA TGATGATAAG ACAATTGTAG AAGCTATAGA AATCTACTTG 
GAAAACGAGG GCTATAAAAT ATTCAAAGCT TCTAATGGAA TAGAAGCTTT GGAACTAATT
GAAGGAAATG AGATACATCT TATTATCATG GATATTATGA TGCCTAAAAT GGATGGATTA
AGAGCTACCA TGAAAATCAG AGAGGAGAAA AATATACCGG TAATAATGCT TTCAGCTAAA
TCTGAGGATA CGGACAAAAT AATAGGATTA AATTTAGGAG CGGATGATTA TATAACCAAG
CCATTTAATC CCTTAGAGTT AATTGCAAGG ATTAAATCCC AACTGAGGAG ATTTACAATA
TTAGGAAGTC TGGAAAGCAA AAGTAATGTG TATAGCACAG GAGGACTGGC GATCGATGAT
GAAAGTAAAA TCATAACCGT TGACGGAGAT GAGATTCATC TTACGCCGGT ACAATATAAG
ATATTAAAGC TTCTTACTGC AAACGCCGGG AGAGTATTTT CCATAGATGA GATCTATGAG
AAGGTTTGGA ATGAAACAGC CTTTAGTCCG GAAAATACAG TAGCAGTACA TATAAGAAAA
ATCAGAGAAA AAATTGAGAT AAATCCCAAA GAGCCAAAAT ATCTGAAGGT GGTGTGGGGA
ATTGGATACA AAGTTGAAAA ATTATAG
 
Protein sequence
MNILVCDDDK TIVEAIEIYL ENEGYKIFKA SNGIEALELI EGNEIHLIIM DIMMPKMDGL 
RATMKIREEK NIPVIMLSAK SEDTDKIIGL NLGADDYITK PFNPLELIAR IKSQLRRFTI
LGSLESKSNV YSTGGLAIDD ESKIITVDGD EIHLTPVQYK ILKLLTANAG RVFSIDEIYE
KVWNETAFSP ENTVAVHIRK IREKIEINPK EPKYLKVVWG IGYKVEKL