| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1336 |
|---|
| Symbol | |
|---|
| ID | 8428285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1363502 |
|---|
| End bp | 1364188 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 645033672 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_003190836 |
|---|
| Protein GI | 258514614 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0802102 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATATAC TGGTCTGTGA TGATGATAAG ACAATTGTAG AAGCTATAGA AATCTACTTG
GAAAACGAGG GCTATAAAAT ATTCAAAGCT TCTAATGGAA TAGAAGCTTT GGAACTAATT
GAAGGAAATG AGATACATCT TATTATCATG GATATTATGA TGCCTAAAAT GGATGGATTA
AGAGCTACCA TGAAAATCAG AGAGGAGAAA AATATACCGG TAATAATGCT TTCAGCTAAA
TCTGAGGATA CGGACAAAAT AATAGGATTA AATTTAGGAG CGGATGATTA TATAACCAAG
CCATTTAATC CCTTAGAGTT AATTGCAAGG ATTAAATCCC AACTGAGGAG ATTTACAATA
TTAGGAAGTC TGGAAAGCAA AAGTAATGTG TATAGCACAG GAGGACTGGC GATCGATGAT
GAAAGTAAAA TCATAACCGT TGACGGAGAT GAGATTCATC TTACGCCGGT ACAATATAAG
ATATTAAAGC TTCTTACTGC AAACGCCGGG AGAGTATTTT CCATAGATGA GATCTATGAG
AAGGTTTGGA ATGAAACAGC CTTTAGTCCG GAAAATACAG TAGCAGTACA TATAAGAAAA
ATCAGAGAAA AAATTGAGAT AAATCCCAAA GAGCCAAAAT ATCTGAAGGT GGTGTGGGGA
ATTGGATACA AAGTTGAAAA ATTATAG
|
|---|
| Protein sequence | MNILVCDDDK TIVEAIEIYL ENEGYKIFKA SNGIEALELI EGNEIHLIIM DIMMPKMDGL
RATMKIREEK NIPVIMLSAK SEDTDKIIGL NLGADDYITK PFNPLELIAR IKSQLRRFTI
LGSLESKSNV YSTGGLAIDD ESKIITVDGD EIHLTPVQYK ILKLLTANAG RVFSIDEIYE
KVWNETAFSP ENTVAVHIRK IREKIEINPK EPKYLKVVWG IGYKVEKL
|
|---|
| |