Gene Dtox_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1328 
Symbol 
ID8428277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1351979 
End bp1354768 
Gene Length2790 bp 
Protein Length929 aa 
Translation table11 
GC content45% 
IMG OID645033667 
Productpentapeptide repeat protein 
Protein accessionYP_003190831 
Protein GI258514609 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000290536 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000145927 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTTTA TCGGAAAATG GAACTTTTCC ACCCCGGATA ATGCTTTTAT AGGTATTGAC 
TCTGGGGGAA AGCTGATAAT CTATCCGAAA CCGGTGGATG GAATGTTGAA TTTTAATGCT
TATGGCAGCA ACAGCAAATT TATGCTTCAG TCTGCCGTTT TATCCGGAAC AGGCGCCGGA
AAATATGTGG AGGGAGCAGG TGATAATTAT CAGGCTTCTC TGGAGCGTGA AGGTGCGGTG
TATAACTTTG CGCTGGAGGA TGCAGGAAAT GACAAGATCC GGATTGTGGA TTTCGGTATA
AACGGACAAG GAACGGACGT TTATTATCTC AATGTTTCCG GTCAAACCCT TGGGCGTGTC
AAAAAAGACA GCAATCCGCC TTCAACCACT CTATTTACTC AAACTGTTGT GACAAACGGT
TTGGATTTTA TCCAGAAGTG GGGGGGCGAA GGAGCAGATT TTACATGGGT ATATTTCGGG
GGAGTACAAT TTTCAAGCGG GGTCAGGTTT TCCAATGCAA CATTGTCCTA TTGTAATTTT
GAAGCTGCCG TTCTGCTCAA TGCCCGTTTT CAGACTACCC AGTTGGATCA TACGAATTTT
AAGAAAGCTG CGCTGACAGG TGCTAATTTA AATAATGCCT GCTTAAATAA CAGCGACCTT
ACCGGTGCTT TCCTTTCAAA TGCAGTGATG AATCAGATAA AATGCCGGGA GGCAGTTCTT
GAAGAAGCGA ACCTTAGCGG GACTTCGTTG AATGATGCAG ACTTCACTTC TGCCAGACTA
AGAAAAGCGG ACTTCACCAA GGCGATAGTC AACGGGGTCA ATTTGACCGA TACCGATCTC
AGAGAGGTTA AGATGAGCAA CCCCAAAGAT CCCGGACAAT GGACCATCTA TATGAAAAAT
GCTGTTATCA GTTCAAAGAC CAACTTTGCC GGAGCGCAAA TGCAGTATTT AAACCTCACA
GGTCAAAATC TGGACAACGT TGTTTTTGCC CATACGGATC TGACAGGGTC GGCAATGGAC
AATACAAGGC TCAATCATGC AGACCTTAGT TATGCAAACC TGTCAAATGT CAGTATTACC
GGAAATATTC CAATGCATGG AGCAAATCTT TCCAATTCAG TTTTAAGCTC AACCAACCTG
ACGGGTGCTC AAATGGGCTC TTTGAGCGTG TTGTTCCGTA TTACGGATCA AACGGGGGTT
GCAGGGTTTA AAAAAGCGCT GCAGAATTCC GATACGGTAA CGGTGAAAAA GATATTTGCC
GATAACGGTG TACCTTTAGA GGGAGATATA GTAATAAACT CATCCCAGTA TGCCCCGGAA
AGGGTCTGGG AGGTCCGTAC CGCAACAAAA ACCTATACGG TCAGGCTGGA AATAATAAAT
AACGCTGAGG CAATGGTGGT GTATGAGACA GTTACTGCCG CTATAATTGA AAATGCCTAT
ATGATGAATG CGGTGCTTAC CTCTGCTAAT CTTTATAATG TCAGAGCCTC AGGAATACAG
CTGTTCGGAC CCAAAGCAAA GCTGGACGGG AATGCCATTT TGGAAAAAGC CCAATTTGAC
GCCTCAAATT TAAGCGGACT TAATTTAAAA CAAGCCCTGC TTTACGGCAT TAATTTGAAC
TATAGCAATC TGGTCGGCGC GCAGCTTCAA GGAGCAAAGC TTGGGCTGGA TTCCGACGGT
GGGCAGGCTA CCTTGAAAAA TTCCAATTTA CAGGGAGCGG ATTTCTCGGA TGCGTCCCTT
GATTATGCCA TGTTCACCGA TGCCGCTGTT TCTGTGGGCA GTGATGATGG CATGGGTAGA
CCTGACGGTG TCTGGCTTTT TAGTGCCCCG TCAGACCAGA CCGAGGTTTG CCTGCAAGAG
TTGGAAAACA GCAAAAAGCT GTTCAATATG CCGATAGAAA TGGAACAAAA TTTGCAGCCG
GGAAAGGTGA GCCCGGAGCT GAGGGATGCA TTTGCACAGC ATGACGTTGA ATTGAGTGCC
GATGCGCTTG TTTGCGGTCA GGAGATAGGC TTTCAGTGGC AGATAACCGA TGGAAATGAG
CAATATCTTA TTTACGAAGG CTGCGATCAG CAAAAATATA CACCTGCGTT GATCGTAGAT
GTCATTTCTA CGTCCGAGAG CTTTCCGATT CCTCTTAGCC TTAAAAGTGA TCTAAAGAAC
GGTCCTGTGT CCAATTTAAT TAAAGTTGCT TTCGAAACAT ACGGCTCTAT TAATTTGACC
GACCGGGCCT GGCTGACCGT ACAGCCGATA TCTGTTGTAT GGCAGGTGGT GGATTCCAAC
ATAAATTATA CTTTGTGGCG CGGTTTGGAT ATGTCCTGTT CTTTAGCCCT GTTTGCCCGC
CCTAGTCTCT CAAACGTTAC GGCGTTGTTC GGCTCCCGTT CAGTGGTGCT TAGTCAGCGT
GCCCAGGTAA CTGCAAACGG AACCGGTAAA TATATGCTTG ACAATGACAG CAATAATCCG
TACAATCCGC TAAATGGTTA TATACGGTTT AATGTGATTA AAAATGGTAA TGTTCTGGAT
GTTTATGGGT ATGCTGTTCG AATTTTGGCT ACCGGTGCCG ATAATCAGCA GGAATATAAA
AACATTATAT GTGAGGTTAC CAAGCTGTCT GAAAATGAAT TGACGGATCA AACTGTATGT
CCGAACAGTG CATTCACCAG GACAAACAAA GCCAATATGC TGCCCTTTCG CCAATGGATG
CGTGCCCGTG TACTTCCGCG GCCACCCGTA TGTATACCGT CTCTGGACGG AACCTATTAT
TGTCCCAATA GCGTGGAAGG CGGTATGTAG
 
Protein sequence
MNFIGKWNFS TPDNAFIGID SGGKLIIYPK PVDGMLNFNA YGSNSKFMLQ SAVLSGTGAG 
KYVEGAGDNY QASLEREGAV YNFALEDAGN DKIRIVDFGI NGQGTDVYYL NVSGQTLGRV
KKDSNPPSTT LFTQTVVTNG LDFIQKWGGE GADFTWVYFG GVQFSSGVRF SNATLSYCNF
EAAVLLNARF QTTQLDHTNF KKAALTGANL NNACLNNSDL TGAFLSNAVM NQIKCREAVL
EEANLSGTSL NDADFTSARL RKADFTKAIV NGVNLTDTDL REVKMSNPKD PGQWTIYMKN
AVISSKTNFA GAQMQYLNLT GQNLDNVVFA HTDLTGSAMD NTRLNHADLS YANLSNVSIT
GNIPMHGANL SNSVLSSTNL TGAQMGSLSV LFRITDQTGV AGFKKALQNS DTVTVKKIFA
DNGVPLEGDI VINSSQYAPE RVWEVRTATK TYTVRLEIIN NAEAMVVYET VTAAIIENAY
MMNAVLTSAN LYNVRASGIQ LFGPKAKLDG NAILEKAQFD ASNLSGLNLK QALLYGINLN
YSNLVGAQLQ GAKLGLDSDG GQATLKNSNL QGADFSDASL DYAMFTDAAV SVGSDDGMGR
PDGVWLFSAP SDQTEVCLQE LENSKKLFNM PIEMEQNLQP GKVSPELRDA FAQHDVELSA
DALVCGQEIG FQWQITDGNE QYLIYEGCDQ QKYTPALIVD VISTSESFPI PLSLKSDLKN
GPVSNLIKVA FETYGSINLT DRAWLTVQPI SVVWQVVDSN INYTLWRGLD MSCSLALFAR
PSLSNVTALF GSRSVVLSQR AQVTANGTGK YMLDNDSNNP YNPLNGYIRF NVIKNGNVLD
VYGYAVRILA TGADNQQEYK NIICEVTKLS ENELTDQTVC PNSAFTRTNK ANMLPFRQWM
RARVLPRPPV CIPSLDGTYY CPNSVEGGM