| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1307 |
|---|
| Symbol | |
|---|
| ID | 8428255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1325264 |
|---|
| End bp | 1326475 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 645033647 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_003190812 |
|---|
| Protein GI | 258514590 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000080294 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAC TACTTGCTAT TGATGGGGGT TTGCCGGTCA GGGAGAGTTT TTTGCCGGTA
AGCAAGCCAT TTATTGATCA GGAGGATATT AAAGCTGCAG CGGCTGTTCT GAAAAGTGGG
ATCTTATCAG AAGGCCCGCA GACAGAGGCC TTTGAGCAGT CCTTTGCCAG GTATACAGGG
GCCAAATATG CAGTAGCAGT ATCCAGCGGC AGTGCCGGTT TGCACATTGC GCTAAGAACT
GCTGCTATCG GGCACCAGGA AGAAGTATTA ACGTCTCCTC TGAGCTTCCC AATAAACTCT
AATTGCATTC TTTACCAGCA GGCTATTCAT ACCTTTGTAG ATATTGATAC GGCTACCTAT
AATATGGATA CCAAAATTTT AGCTCAGAAG TTATCTTACC GGTCAAAAGC TGTTATACCT
GTCCATTTTG CCGGTCAACC CTGTGACATG GATGAGGTTA ATAAATTAGC CGCAAAAAAT
AATTTGATTG TTATTGAAGA TGCTACACAG GCACTTGGTG CCGTCTATAA AGGTGAAAAA
ATAGGCAGTG CTGAGAATAT GACCGTTTTT AGTTTTCATG CGAACCAGAG CCTGTCTACC
GGTCAGGGAG GAATGGTTAC TACCGGTTCT GAGGAAACTT ATAAATGGCT TAAAATATTC
AGCAACCTGG GCATTGTAAG AGAACAGGCC TCACTGGTAG AACAGATTGG ACCCTGGCAT
TATGAAATGC AAGATCTTGG TTTTAACTAT AATATAACTG AAATGCAGGC GGCATTGGGA
CTAAGTCAGT TAGCTAAGCT TGATTGGTTC CTGGCTGCCA GAAAGAAAAT AGCCTCCTGT
TACAATGAAG CATTGTCTGG CTTAGCAGGA CTGGTGCTGC CTGGACAATT GTCCGGCGTA
GAATCGGCGT GGCACCATTA TATTATACGA ATCAAACCGG AAGCTTTAAA CACAGACCGC
CAGGGGATAT ATCAAGCGCT CAGGGCAGAA AATATCGGGG TAGATGTAAA CTACCTGCCC
ATCTTCCTGC ATCCCTATTA TAAATGGCTT GGCCATCCTG ACGTATGTAC CCTGGAAGGA
AGTCTCTGCC CAAGAGCCGA AGAAGTGTAT AATAATATGC TATCACTGCC AATATTCCCT
GCCATGCAAG AGCAGGATAT CGAAGATGTA ATTAAAGCGG TAAAAAAAGT TTTTAATTAT
CATGCTAAGT GA
|
|---|
| Protein sequence | MTKLLAIDGG LPVRESFLPV SKPFIDQEDI KAAAAVLKSG ILSEGPQTEA FEQSFARYTG
AKYAVAVSSG SAGLHIALRT AAIGHQEEVL TSPLSFPINS NCILYQQAIH TFVDIDTATY
NMDTKILAQK LSYRSKAVIP VHFAGQPCDM DEVNKLAAKN NLIVIEDATQ ALGAVYKGEK
IGSAENMTVF SFHANQSLST GQGGMVTTGS EETYKWLKIF SNLGIVREQA SLVEQIGPWH
YEMQDLGFNY NITEMQAALG LSQLAKLDWF LAARKKIASC YNEALSGLAG LVLPGQLSGV
ESAWHHYIIR IKPEALNTDR QGIYQALRAE NIGVDVNYLP IFLHPYYKWL GHPDVCTLEG
SLCPRAEEVY NNMLSLPIFP AMQEQDIEDV IKAVKKVFNY HAK
|
|---|
| |