Gene Dtox_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1286 
Symbol 
ID8428234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand- 
Start bp1307516 
End bp1308601 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content40% 
IMG OID645033626 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003190791 
Protein GI258514569 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.374081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTATAA AAATTGGCAT TAATGGTTTT GGGCGAATTG GGCGTAATGT ATTTCGAACT 
GCTCTTAACA ACCCGGAGAT AGAAATAATT GCTGTCAATG ATTTAACCGA CTCTAAAACT 
CTGGCTCACT TATTAAAATA TGATTCAATT CACGGAGTGC TAAATGCTAA TGTCAGATCA 
ACTCCCAAAG GCTTTACGGT AAACGGTAAG GAAGTTACAG TCTTTGCGGA AAAAGATCCT 
GCCAATATCC CCTGGGGTAA TCTGGGCATA CAGATGGTTG TTGAATCCAC AGGGAGATTT 
ACTAAAGGTT CGGATGCAGC AAAACACATT CAAGCAGGAG CGAAAAAGGT TGTCATCAGC 
GCTCCCGGTA AAGAAATAGA TGCTACCATT GTAATGGGTG TTAACCAGGA CATATATGAC 
CCGGCAAAAC ACAATATAGT TTCTAATGCC TCCTGTACTA CAAATTGCCT GGCTCCTGTG 
GTCAAAGTAT TAAATGATAA TTTTACTGTA AAGAGAGGTT TAATGACTAC CGTTCATTCC 
TATACCAATG ACCAACAGAT ATTAGACCTG CCACACAAGG ATTTAAGACG TGCCAGAGCT 
GCTGCTGAAT CTATTATTCC CACCACTACC GGTGCAGCCA AAGCTGTTGC ACTGGTTATT 
CCTGAATTAA AAGACAAACT TAACGGTTTT GCTATGCGGG TACCCACCCC CAATGTTTCA 
ATTGTTGACT TTGTGGCAGA GTTAAATAAA AGTGTAACAG CAGAAGACAT AAACAGTGCC 
TTGAAAAGCG CCTCCGATAA TGAATTAAAA GGCATACTTG CCTATACTGA GGCCCCCCTG 
GTATCAAGAG ATTATTATAG TGATCCTCAT TCCTCCATTG TTGATGCTCT TTCAACAATT 
GTATTGGATA AAACAATGGT AAAAGTCTTA GCCTGGTATG ACAATGAGTG GGGTTATTCC 
TGTAGAGTAC TGGATTTATT GATTTACATG GCTAAAAGAG AACAAGGAGC AGTGCCTGTA 
ATTACATGGA CCGGTATTAC TAACAAAAAT CATTATGAAA ACGTATCAGC AGCATATTCT 
GAATAA
 
Protein sequence
MPIKIGINGF GRIGRNVFRT ALNNPEIEII AVNDLTDSKT LAHLLKYDSI HGVLNANVRS 
TPKGFTVNGK EVTVFAEKDP ANIPWGNLGI QMVVESTGRF TKGSDAAKHI QAGAKKVVIS 
APGKEIDATI VMGVNQDIYD PAKHNIVSNA SCTTNCLAPV VKVLNDNFTV KRGLMTTVHS 
YTNDQQILDL PHKDLRRARA AAESIIPTTT GAAKAVALVI PELKDKLNGF AMRVPTPNVS 
IVDFVAELNK SVTAEDINSA LKSASDNELK GILAYTEAPL VSRDYYSDPH SSIVDALSTI 
VLDKTMVKVL AWYDNEWGYS CRVLDLLIYM AKREQGAVPV ITWTGITNKN HYENVSAAYS 
E