Gene Dtox_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1277 
Symbol 
ID8428225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1297345 
End bp1300362 
Gene Length3018 bp 
Protein Length1005 aa 
Translation table11 
GC content41% 
IMG OID645033617 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003190782 
Protein GI258514560 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.404382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACAT CAAAACCAGT AACCGGGTCT GTATTAGTAG TGGGTGGCGG TATCGCCGGG 
ATTCAGGCGT CGCTTGATTT GGCTGAGTCA GGCTTTTATG TCTACTTAGT TGAGAAAACA
CCTGCTATCG GTGGGGTTAT GCCTATGCTG GATAAGACCT TCCCGACCAA CGATTGTTCA
ATGTGTATTC TCTCACCCAA ACTGGTTGAG TGTGGTGGGC ACTTGAATGT GGATGTAATG
ACCACCTCAG TAGTTCAAGA CATTAAAGGT GAACCGGGTA ATTTTACAGT TACTATCTTA
AAAAAGGCAA GATTCATTGA TCCATTAAAA TGTACCGGTT GTGGATCTTG TGTTGAGGTA
TGCCCGAAGA AAGTTACTGA CGAATTTGAT CAAGGATTAC GTGATCGCAG ATCAATTTAC
AAACCTTATG CGCAAGCATT TCCAAATGCT TTTGCAATTG ATGGCAGCAG TTGTTTGAAG
ATTAAAAAAC CAAAAGCTTG CGGTAAATGT CTGGAAGTAT GTCAGGCTGG GGCTATTGAC
CACACAATGC AAGACGAAAT AGTAGAAATT AATGTCGGTT CCGTTATTTT ATGCCCTGGT
TTTGAAAAGT TTGATGCCAA ACTTTTATCC TACTATGGTT ATGGAAAATT TGCCGGTGTT
GTTACAAGTT TGGAGTTTGA GCGTTTGCTC AGTGCTTCTG GTCCTTTCGG CGGTCATTTA
ATCAGACCTG CTGATGAAAG GGAACCTAAA AAGGTTGCCT GGATCCAGTG TGTTGGATCC
AGAAATGAAA AAGAAGGTTG CGGCTACTGT TCTGCAGTTT GCTGTATGTA TGCTATTAAA
GAAGCTGTAA TTGCCAAAGA GCATGCTCAT TATCCGTTGG ATACTACAAT ATTCTTTATG
GATATGCGTA CCTATGGTAA GGATTTCGAA AAATACTATA ACAGAGCTAA AGAAGAGCAT
GGCGTAAAAT TTGTTCGCTC CAGAATTTAT GAAGTTACCG AAAATGAAGA CAAAAACTTA
GTTATCAGAT ATTCTAATGA AGATGGTACT ATTACCACTG ACGTTTTTGA TATGGTAGTT
CTTTCAATTG GACTAAAACC AAATTCAGAT ATGGTGGAAC TGGCTAATAA AGTTGGTATT
GAGCTTAACA AGTACAATTT CTGTGAGGCA AAAGAACTTA CCGGAGTCGA AACATCTAAA
GAAGGTATCT ATGTAGCCGG TGCTTTCAGT GGCCCCAGAG ATATTCCGGA GACAGTTATT
GAAGCCAGTG CTGCTGCAGG AGCATGCGCA GTTCAACTTG CATCAGCCCG TGGTACATTG
ATTAAAACTA TGGAATATCC AGAGGAAATA AATGTATATG GTGAGATACC TAGAACCGGT
GTATTTATTT GCCACTGCGG TATTAACATA GGTGGCGTGG TAAATGTTCC GAGTGCTGTT
GAATATGCCA AAACACTACC TGGTGTAGTT TATGCTCAGG AGAGTCTGTA TGTTTGTTCA
CAAGATGCTC AGGTGCAGAT AAAAGAAAAG ATTGCAGAAT ATAATTTAAA CCGTGTTGTT
GTAGCTTCTT GCACTCCGAG AACTCATGAG CCGCTTTTCC AAAAAACCTT ACATGAAGCT
GGTCTTAACC CGTATTTATT CGAAATGGCC AACATTCGTG ATCAGTGTTC CTGGGTACAC
ATGCATGAGC CGGAAAAAGC TACTGTAAAA GCCAAAGACT TGGTGAAAAT GGCTGTAGCT
AAAGCCCAAT TGCTAACACC GTTATATGAG CAAGAACTTG ATATGGATCA CGGTGCTCTT
GTTATCGGTG GCGGTGTTTC TGGAATGACT AACGCGTTAA ATCTGGCTGA GCAAGGTTAT
AAAGTAAGCA TAGTGGAAAG AACTGAAAAG CTGGGTGGCA TAGCAAATCG TATAACCACT
GGTTTTAAAG GCGAGGATAT TAAAGGCTTT GTGGCTAATC TTGCAAGTAA GGTAAACAAC
CACGCAAATA TAGATGTTTA TCTGAACAGT GATTTAGCTG ATGTTCATGG TTATCTGGGT
AATTATTTGA CTAAACTGAC CGATGGACAG GAAATTAAAC ACGGCGTAAC TATTATTGCC
AACGGTGGTA TGGAATACAA ACCTACAGAG TATCTGTATG GTGAAAATGA TAGAGTTATT
ACGCAGTTGG AACTGGAAGA AGCTATGGTT TCCGGCGATG CTAAGGTGAA AGATGCCAAA
AACTTTGTTC TGATCAACTG TGTTGGTTCA CGTGATAATG AAAGACCATA TTGCAGTCGT
GTTTGCTGTA ATAAATCTAT TAAATTAGCT CTGAAGATTA AAGAAAAGAA CCCTGATGCC
AATGTCTTTG TTTTGTACCG TGACATCAGA TCTTATGGTT TCTTTGAAGA TAATTATCGT
GAAGCAAGAT GCAAAGGAGT TATCTTCATT CGTTATTCTG TTGACAATAA ACCTGTAGTA
GAGGCTGTCG GTGACGTTAT AAAAGTTACT GTAACTGATC ATGTACTAGG ACAGCCGCTT
GAAATAGAAG CTGATATTAT CTGTTTAGCA GCTGCTATAG TGCCGCAAAA GGATAACGGA
AAATTATCTC AGTTCTTTAA GGTGCCTTTA AATGCTGATG GCTTCTTCCT TGAAGCACAT
TTAAAGCTTC GTCCGGTTGA TTTTAGTACT GACGGTGTGT TTATGTGTGG TTTGTGCCAT
GGACCGAAAT CAACTGAAGA AAACGTTGCT CAGGCCAAGG CTGCTGCTGC CAGAGCCGGT
ACTGCTTTAA GCAAAGAAAA TGTACAGGCA GAAGGTAAAA TTGCCAATAT TAATAATAAA
AAATGTGCAG GCTGCGGAGT TTGTGAATTG GTATGCCCGT CGAAGGCCAT TGCCGTTGAC
ACTGAGAAAA TGATTGCCGT GGTTAACGAA GCTTTGTGTA AAGGTTGTGG AGCATGTGCT
TCCTCCTGCC GTTGCGGTGC ATTAAATATT AAGGGATTTA CTAATGAGCA AATCGTAGCT
ATGATCAGTG CGCTTTAG
 
Protein sequence
MSTSKPVTGS VLVVGGGIAG IQASLDLAES GFYVYLVEKT PAIGGVMPML DKTFPTNDCS 
MCILSPKLVE CGGHLNVDVM TTSVVQDIKG EPGNFTVTIL KKARFIDPLK CTGCGSCVEV
CPKKVTDEFD QGLRDRRSIY KPYAQAFPNA FAIDGSSCLK IKKPKACGKC LEVCQAGAID
HTMQDEIVEI NVGSVILCPG FEKFDAKLLS YYGYGKFAGV VTSLEFERLL SASGPFGGHL
IRPADEREPK KVAWIQCVGS RNEKEGCGYC SAVCCMYAIK EAVIAKEHAH YPLDTTIFFM
DMRTYGKDFE KYYNRAKEEH GVKFVRSRIY EVTENEDKNL VIRYSNEDGT ITTDVFDMVV
LSIGLKPNSD MVELANKVGI ELNKYNFCEA KELTGVETSK EGIYVAGAFS GPRDIPETVI
EASAAAGACA VQLASARGTL IKTMEYPEEI NVYGEIPRTG VFICHCGINI GGVVNVPSAV
EYAKTLPGVV YAQESLYVCS QDAQVQIKEK IAEYNLNRVV VASCTPRTHE PLFQKTLHEA
GLNPYLFEMA NIRDQCSWVH MHEPEKATVK AKDLVKMAVA KAQLLTPLYE QELDMDHGAL
VIGGGVSGMT NALNLAEQGY KVSIVERTEK LGGIANRITT GFKGEDIKGF VANLASKVNN
HANIDVYLNS DLADVHGYLG NYLTKLTDGQ EIKHGVTIIA NGGMEYKPTE YLYGENDRVI
TQLELEEAMV SGDAKVKDAK NFVLINCVGS RDNERPYCSR VCCNKSIKLA LKIKEKNPDA
NVFVLYRDIR SYGFFEDNYR EARCKGVIFI RYSVDNKPVV EAVGDVIKVT VTDHVLGQPL
EIEADIICLA AAIVPQKDNG KLSQFFKVPL NADGFFLEAH LKLRPVDFST DGVFMCGLCH
GPKSTEENVA QAKAAAARAG TALSKENVQA EGKIANINNK KCAGCGVCEL VCPSKAIAVD
TEKMIAVVNE ALCKGCGACA SSCRCGALNI KGFTNEQIVA MISAL