Gene Dtox_1259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1259 
Symbol 
ID8428198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1276091 
End bp1276738 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content39% 
IMG OID645033590 
Productcyclase family protein 
Protein accessionYP_003190764 
Protein GI258514542 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.240385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TATATGACAT ATCTTTACCT GTGTGTGAGG ATACAGTTAT TTATCCGGGG 
GATCCGCCGG TTACCGTCAG GCGGGTATCG GATATAAATA AAAGTGATTT GATAAATATA
TCAGAGATAA CCTTAAGCAC GCATACGGCT ACTCATATAG ATGCTCCCAA GCATCTTTTC
AGTCATGCAC AGGGAATAGA CAGAATCCCT TTAGAAGTTC TTATTGGGCC GGTAACAGTA
TATGAGTTTC TGAAATTGCG GCGGATTGAG GTAAGTCATC TGCAAAATTT ACCTTTAAAA
GCAGGTGATA GGGTATTATT TAAAACCGAT AATTCATTTT TACCCAGGGA TAAATTTTGC
CCGGATTATA CCTGTTTATC TCCGGAAGCA GCGGGGTATA TAGCCGAAGT AGGATTAATA
CTGGTTGGTA TTGATTATTT TTCTGTTGAT CCCTTTGTTG GCAGTGATGA AAATTATGCT
GTAGATAGCC TGGCAGTGCA TAAAACTTTG CTAAGTAAAG GAATAATCAT ATTGGAAGGT
ATAGATTTAA GCCAGATCAA GCCTGCTTGT TATGAGCTTA TCTGCTTGCC TCTTAATTTG
GTTAACGCTG ACGGTTCACC GGTGAGGGCA ATATTAAGAG ATCTGTGA
 
Protein sequence
MKKIYDISLP VCEDTVIYPG DPPVTVRRVS DINKSDLINI SEITLSTHTA THIDAPKHLF 
SHAQGIDRIP LEVLIGPVTV YEFLKLRRIE VSHLQNLPLK AGDRVLFKTD NSFLPRDKFC
PDYTCLSPEA AGYIAEVGLI LVGIDYFSVD PFVGSDENYA VDSLAVHKTL LSKGIIILEG
IDLSQIKPAC YELICLPLNL VNADGSPVRA ILRDL