Gene Dtox_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1237 
Symbol 
ID8428176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1253400 
End bp1255316 
Gene Length1917 bp 
Protein Length638 aa 
Translation table11 
GC content40% 
IMG OID645033570 
ProductABC transporter related 
Protein accessionYP_003190744 
Protein GI258514522 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000223212 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGT TGCAAGCAGC ACACGTCAGC AAAGCCTTTG GTCAGAGTAT CATACTTAAT 
GATGTAAATA TAAATATTCA GGAAAAAGAA AGGGTAGGTC TGATCGGGCC AAACGGTGCC
GGCAAGTCTA CACTGCTGAA GATTTTAACG GGCAGCATGA ATTGTGACAG TGGCAATATT
ATAAAACCCA GGGAAGTTTC CTTAGGTTAT CTGGCGCAGG ACGGTGGCTT AGTATCAGAG
CGGACAATAT GGGATGAAAT GATCAGTGTT TTTCAAGAGC TGATTGCAAA AGAACTTGTC
TTGAGAGAGC TGGAAAAGCA GATGGGCAAC GGTAGATTAT CCGTAGATAT CAGAGAGCAG
CAGAAGTTTA TGGAGGAGTA TGCCGGTTTA GCTGAGGAAC TGGAACAAAA AAACTATTAT
GGCTATGAGG CTTCTGTAAG GGGTGTATTG CACGGCTTGA AATTTACGGT TGATGATTAT
CATACTCTTG TCAGATCTCT GAGCGGAGGT CAGAAAACTC GTCTTGCTTT AGGCAAGCTT
TTGCTTTCAC AACCGGATGT TCTGGTTTTA GACGAGCCTA CCAATTACCT GGATATGGAG
ACAATGTCCT GGTTGGAGCA GTATTTGCAA GAATATACGG GTGCCGTTTT AGTAGTCTCT
CATGATAGGT ACTTTTTGGA CTCACTGGTG CGTGTTGTCT ATGAACTGGT TAATGGCAGA
GCGGTCAGGT ATGCCGGTAA TTACTCGCAG TTTGTTGAGA TAAAGGCCGG GCAGGTAGAG
CAGCAATTAA AGGAGTACAA AAAACAAAGT GAGGAGATCA CCCGGACCGA GGACTTTATC
AGACGTAATA TTGTACGTGC ATCAACCACC AAGCGGGCTC AAAGCCGTCG CAAACGGTTG
GAGAGTATGG AAAAAGCAGA GAAACCCATG ATGCAAAAAA ATGTAAGTTT TTCTTTTGGT
CTATCTGTAG AAAGCTCGTA TGAGGTGCTA AGGGTTAAAA ACCTTGATAT AGGCTATAAA
GATAATCCTC TGGCCAGTGG CATAAACTTT GAAATTGAGA AAGGAGAAAG AGTGGCATTG
GTTGGGCCAA ACGGTGTAGG GAAAACCACT TTGCTGAAAA CTCTTTCGGG TACAATAAAA
GCTTTAGATG GTGCTATCTT CACTGGCATA AATGTAAAAT TAAACTGTTA TGAGCAGGAA
CAAGCTAAAA TTATTAGTAC CAAGCAGGTT TTGCATGAGT TGTGGGATGA GTATCCTCAT
CTTGATGAAA AATATGTCAG AACTTTATTA GGCAATTTCT TATTCAGGGG TGACGATGTT
TTTAAAAATG CGTCTGATTT AAGCGGGGGA GAGAGATCCA GGCTCTCATT GGCTAAATTG
GTGTTGAAAA AAGCTAATTT TTTGCTCCTG GACGAACCCA CCAATCATCT GGATGTATAT
AGTAAAGAGG TGCTGGAAGA TTCCTTGGCA GATTATCAGG GAACCTTATT GTTTGTTTCT
CATGACAGGT ATTTTCTAAA TAAAATTGCC ACACGTGTTC TTGAATTGAC TCAATTTGGA
ATTATTGATT ATATCGGCAA CTATGATTAT TATCTCAAAA ACAGAAAAAG CCGCAGTATA
AATATTGTGG AGCTTGTCAA CAGGGAGGAA GAGATAAAGA AAGAAGCGGC CAGGCATAAT
TACCAGTTCC AAAAAGAGGC GCAGCGTCAA AAAGAAAAAT TAAATCGCCG TAAATATGAA
CTGGAAGAGT TAATCAGAGA AACAGAGTCA GAAATTGCTC TGCTGGAAAA AGAAATATAT
TTACCGGAGG TTAATCAAAA CATTTCATTA TTGTTGGAAA AAAATAATAA TTTGGAGAGC
AAGAAGCTGT CCTTGGAAGT ATATTTAGAT GAATGGATAG AATTAGCTGA TCAATAG
 
Protein sequence
MIMLQAAHVS KAFGQSIILN DVNINIQEKE RVGLIGPNGA GKSTLLKILT GSMNCDSGNI 
IKPREVSLGY LAQDGGLVSE RTIWDEMISV FQELIAKELV LRELEKQMGN GRLSVDIREQ
QKFMEEYAGL AEELEQKNYY GYEASVRGVL HGLKFTVDDY HTLVRSLSGG QKTRLALGKL
LLSQPDVLVL DEPTNYLDME TMSWLEQYLQ EYTGAVLVVS HDRYFLDSLV RVVYELVNGR
AVRYAGNYSQ FVEIKAGQVE QQLKEYKKQS EEITRTEDFI RRNIVRASTT KRAQSRRKRL
ESMEKAEKPM MQKNVSFSFG LSVESSYEVL RVKNLDIGYK DNPLASGINF EIEKGERVAL
VGPNGVGKTT LLKTLSGTIK ALDGAIFTGI NVKLNCYEQE QAKIISTKQV LHELWDEYPH
LDEKYVRTLL GNFLFRGDDV FKNASDLSGG ERSRLSLAKL VLKKANFLLL DEPTNHLDVY
SKEVLEDSLA DYQGTLLFVS HDRYFLNKIA TRVLELTQFG IIDYIGNYDY YLKNRKSRSI
NIVELVNREE EIKKEAARHN YQFQKEAQRQ KEKLNRRKYE LEELIRETES EIALLEKEIY
LPEVNQNISL LLEKNNNLES KKLSLEVYLD EWIELADQ