Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1228 |
Symbol | |
ID | 8428167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1247010 |
End bp | 1247795 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 645033561 |
Product | transcriptional repressor CodY |
Protein accession | YP_003190735 |
Protein GI | 258514513 |
COG category | [K] Transcription |
COG ID | [COG4465] Pleiotropic transcriptional repressor |
TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000144432 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGCAC TGCTTGAAAA AACTAGATCA ATCAACAGAC TACTTCAAAA ATCAGCCGGA TACCCTGTAG ATTTTAAGGA AATTGCAGCG TCTCTCAGTG ATAATTTAGG TTGCAGCGTT TATATTATCG ATCGCAGAGG AAAACCGCTT GGACACTCTT ACTTGCAAGG TTTTACTTGT GAAATCATGG TAGATATAGT GGAAGCCAAG GAAAGTTTTC CAACCGAATA CAACGATAAT TTGTTGCAGC TTACAGAAAC ACACTCTAAT TTCTGCCAAA CAGCCAATGC TTGTGTATTT GATTATGAAT GTAGGTGCAA ATTTAATAAT AAGGTATCTA CCGTTGTTCC CATAGTTGGT GCAGGATCAC GTTTAGGCAC ACTGGTACTG GCTAAAATTA ACGAGAATTT TAATGATGAG GATCTTGTTT TAGCTGAATA TGGTGCTACG GTCGTTGGTA TGGAGATATT GAGGGCACGG GCAGACAGAA TGGAAGAAGA AGCTCGTAAG AGAGCTGCCG TGCAGGTAGC GTTAGGGACT CTGTCTTATT CTGAATTAGA TGCTGTCCAG CATATTTTTG AACAGCTGGG CGGTGAAGAA GGCCTTTTGG TGGCTAGTAA AATTGCAGAT AGAGTGGGTA TTACGAGGTC TGTAATAGTA AATGCGCTTC GAAAATTTGA GAGCGCAGGC GTTATAGAGT CACGTTCTCT TGGTATGAAG GGGACTTATA TCAGGGTACT AAATGATCGA TTGCTTGATG AATTGGCAAG ATTAAAACAA CAGTAG
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Protein sequence | MRALLEKTRS INRLLQKSAG YPVDFKEIAA SLSDNLGCSV YIIDRRGKPL GHSYLQGFTC EIMVDIVEAK ESFPTEYNDN LLQLTETHSN FCQTANACVF DYECRCKFNN KVSTVVPIVG AGSRLGTLVL AKINENFNDE DLVLAEYGAT VVGMEILRAR ADRMEEEARK RAAVQVALGT LSYSELDAVQ HIFEQLGGEE GLLVASKIAD RVGITRSVIV NALRKFESAG VIESRSLGMK GTYIRVLNDR LLDELARLKQ Q
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