| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1224 |
|---|
| Symbol | |
|---|
| ID | 8428163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1242789 |
|---|
| End bp | 1244108 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 645033557 |
|---|
| Product | gid protein |
|---|
| Protein accession | YP_003190731 |
|---|
| Protein GI | 258514509 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1206] NAD(FAD)-utilizing enzyme possibly involved in translation |
|---|
| TIGRFAM ID | [TIGR00137] tRNA:m(5)U-54 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.122196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGGGAA GTAATATAAC AGTGATTGGA GCGGGTTTAG CAGGTGCAGA GGCGGCCTGG
CAGGCAGCTA AACGCGGTGT GACAGTTGAT CTTTATGAGA TGAGACCGGA GAAAAACACT
CCGGCACACC ATACGGGGGC GTTTGCTGAA CTTGTTTGCA GTAACTCTTT GAGGGCTGCC
AGCATAGAAA ATGCTGTCGG CCTTTTAAAG GAAGAAATGA GACGCATGAA TTCCTTAATC
ATGAAGTGTG CCGATAGTCA TAGTGTCCCC GCCGGGGGCG CCCTGGCAGT AGATCGCCAT
AACTTTGCCC GCGCGGTAAC GGAGGTATTG GAGAATCACC CGATGGTAAC AGTTATACGG
GAGGAAGTTA AAGAAATACC TGGAGATGGA ATTATTGTTC TGGCTACCGG GCCCTTGACT
TCTGATCATA TGGCTGAAAG TATAAAGGCC TTAACCGGCC AGGAATATTT GTATTTTTAT
GACGCGGTTG CGCCTATTGT AAGTTTGGAT TCGGTAGACC AGTCCAGGGT TTTTCGTTCT
TCTCGTTATG ATAAAGGTGA AGCTGACTAT ATAAACTGTC CTATGACCGA GCAAGAGTAC
GAGGCTTTTT GGTTAGAGCT GGCATCTGCT GAAAGGGCGC CACGAAAAGA ATTTGAAAAG
GAGATTAACT TTGAGGGCTG TATGCCGGTG GAGGTGCTGG CTAAAAGAGG GCGGGAGACG
CTTCTTTTTG GGACTATGAA ACCTGTAGGC CTGACAGACC CGCGTACCGG AAAAAGGCCT
TATGCGGTAG TTCAATTAAG GCAGGACAAT GCTGAAGGAA CTCTATACAA CCTCGTGGGT
TTTCAAACAC ATCTCAAGTG GGATGAGCAG CGTCGTGTAT TCAGTATGAT TCCGGGCTTG
GAGCAGGCTG ACTTTGTTCG TATGGGAGTA ATGCATCGCA ATACCTACAT TAATTCTCCA
GCTTTGCTTC TTCCGACACT TGAATGTAAA ATACGTCCCC AACTCTTTTT TGCCGGACAA
ATGACAGGTG TAGAAGGTTA TGTTGAATCC GCGGCGGCGG GGCTTCTGGC AGGTATAAAC
GCAAGCCGTT TAGCTTGCGA AAAAGCACCT CTGGTATTTC CAGCAGAGAC AGCCCATGGC
TCTCTTTTTA ATTACATAAC TGCGGCTGGG AAAGGTAATT TCCAACCTAT GAATGTTACT
TTTGGTTTAA TCCCACCTTT GCAAGAAAGG GTTAGGGACA AGAAAACCAG GAACAGAATG
CTGGCAGAGC GGGCTTTATC GGCGTTGGAT GCCTGGCAGG AGAGTATAGT GGATTTTTGA
|
|---|
| Protein sequence | MTGSNITVIG AGLAGAEAAW QAAKRGVTVD LYEMRPEKNT PAHHTGAFAE LVCSNSLRAA
SIENAVGLLK EEMRRMNSLI MKCADSHSVP AGGALAVDRH NFARAVTEVL ENHPMVTVIR
EEVKEIPGDG IIVLATGPLT SDHMAESIKA LTGQEYLYFY DAVAPIVSLD SVDQSRVFRS
SRYDKGEADY INCPMTEQEY EAFWLELASA ERAPRKEFEK EINFEGCMPV EVLAKRGRET
LLFGTMKPVG LTDPRTGKRP YAVVQLRQDN AEGTLYNLVG FQTHLKWDEQ RRVFSMIPGL
EQADFVRMGV MHRNTYINSP ALLLPTLECK IRPQLFFAGQ MTGVEGYVES AAAGLLAGIN
ASRLACEKAP LVFPAETAHG SLFNYITAAG KGNFQPMNVT FGLIPPLQER VRDKKTRNRM
LAERALSALD AWQESIVDF
|
|---|
| |