Gene Dtox_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1215 
Symbol 
ID8428154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1232677 
End bp1234107 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content43% 
IMG OID645033548 
Productproton-translocating NADH-quinone oxidoreductase, chain N 
Protein accessionYP_003190722 
Protein GI258514500 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTATTA ATTTATCATT GCTTAGCATA GAAATCCTTA CTGCAATACT GGGGCTGGCT 
ATACTGGTAT TGGGTTTAGT GGTACCCAGT AATGCCCGCC GTGGTGTAGG TTATGTAACT
TGCTTGTTCT TGCTGGGTAT TCTGGGAGCA AGCATATTGA CTTGGGACAA TGTCGGCACA
GTGTTTGGCG GCATGTATAT TGTTGACCAG TATTCAATTT TCTTTAAACA GATCTTTATA
ATTGCAGCAA TACTGGTTGT TATGGGTTCC ATGCGTTATG TTAATGAAAT GGGAAGCCAG
TCTGAATATT ACAGCATGCT GGTTTTCACC CTTCTGGGCA TGATGGTTAT GGCTTCAGCA
GGTGATTTCA TCACACTTTA TCTTGGTTTA GAATTAATGA CCATAGCCTT TTGCATATTG
GTTTGCTTCC GTAAATTGGA GACAAAATCA GTTGAAGCAG GTATAAAGTA TATTCTCCTT
GCTGGCATGT CCTCTGCTGT ATTGTTATAC GGTATGAGTT TGATTTACGG TTTGACCGGA
ACGGTACAAA TTAATGAGAT AGCAGGAATT GTTAAACAGG GTACTGCTTC ACCTTTATTG
CTGCTGGGCG TGGTCATGCT GATTGCAGGT TTTGGTTTTA AGATTTCCGC AGTTCCTTTC
CATATGTGGT CACCTGATGT TTACGAAGGT GCTCCTACAC CTGTTACTTC ATTTTTAGCT
GTGGGCTCAA AGGCTGCTTC CTTTGCCATC ATTCTGCGTG TATTTGTCGG TGCTCTGCCG
GGTATATTCA GCAGTTGGTC TATGGTAGTG GCTATACTTG CTGCTGTTAC AATTATAATT
GGTAACCTGG TTGCCATACC GCAAACAAAT ATTAAGAGAA TGCTGGCCTA CTCCAGTATT
GGTCAAGCAG GTTATATCCT GGTTGGTCTG GTAGCAGCTA CAGAGGCCGG TATTAAAGGC
GTAATGTTTT ATGCGTTGCT TTATGTTTTT AGCACGGTGG GTGCTTTTAC CGTTGTCAGT
TCTGTTTTTG ATGCTATAGG CAGTGAGGAA ATCAAGGACT ATGCCGGCTT ATCGCAGCGT
GCTCCGTTAC TGGCGGCAGT TCTAACAATG TCTATGCTGT CTATGGCAGG AATTCCGCCT
CTGGCCGGTT TTGTAGGCAA GTTTTACCTT TTCTCTACAA TAGTTGATAA TTATCTCTGG
CTGGTTTTCA TCGGCTTGGT AATGAGCATG ATTTCAGTTT ATTACTATCT GCGAGTTGCT
CTGGTTATAT ACCGTGACAA GCCGCTTGAT GAAACACCTA TTACGGTATC CAGTTCGGTG
GCTATCACAT TAATTATCAC CATGGTTATT ACCGTTATTC TTGGTGTATA TCCGGGACCG
GTTGCTGAAA TTTCAAATAC CGCAGCACAC TCGTTCTTCT TTTTACCATA A
 
Protein sequence
MGINLSLLSI EILTAILGLA ILVLGLVVPS NARRGVGYVT CLFLLGILGA SILTWDNVGT 
VFGGMYIVDQ YSIFFKQIFI IAAILVVMGS MRYVNEMGSQ SEYYSMLVFT LLGMMVMASA
GDFITLYLGL ELMTIAFCIL VCFRKLETKS VEAGIKYILL AGMSSAVLLY GMSLIYGLTG
TVQINEIAGI VKQGTASPLL LLGVVMLIAG FGFKISAVPF HMWSPDVYEG APTPVTSFLA
VGSKAASFAI ILRVFVGALP GIFSSWSMVV AILAAVTIII GNLVAIPQTN IKRMLAYSSI
GQAGYILVGL VAATEAGIKG VMFYALLYVF STVGAFTVVS SVFDAIGSEE IKDYAGLSQR
APLLAAVLTM SMLSMAGIPP LAGFVGKFYL FSTIVDNYLW LVFIGLVMSM ISVYYYLRVA
LVIYRDKPLD ETPITVSSSV AITLIITMVI TVILGVYPGP VAEISNTAAH SFFFLP