Gene Dtox_1187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1187 
Symbol 
ID8428126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1209375 
End bp1210628 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content45% 
IMG OID645033521 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_003190695 
Protein GI258514473 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00223621 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0169924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATT ATATTGTTCG GGACATTAAA TTAGCACCCG GCGGGCGGCT TAAAATAGAC 
TGGGTCAGAG AGCATATGCC TGTGTTGAAT GAAATCAGAG CTGAGTTTGA AAAAGAGCTT
CCTTTTAAAG GTATACGGGT AGCGATTAGT ATTCATCTGG AAGCTAAGAC TGCTTACTTG
GCGGAGGTGT TGAAAGCCGG TGGTGCTGAT GTGTCTATAA GCGGTTCCAA TCCTCTCTCT
ACTCAAGATG ATGTAGCTGC GGCTCTTGCG GAGGCAGGTA TTAACGTATT TTCCTGGTAC
AATTCCACGC CGGAGGAATA CAAAGAGCAC CTGTTGCAGG TGTTAGATAC TAAACCGCAG
ATTATTATTG ATGACGGCGG GGATTTAGTC AACCTATTGC ATACGGAAAG GAAAAACCTG
GTTGTAAATG TTTTAGGCGG CTGTGAGGAA ACTACTACCG GTGTGATCAG GTTAAGGGCC
TTAGAGCGGG AAGGCGGCCT ATTGTTTCCT ATGGTAGCGG TAAACGATGC TTACTGCAAG
TACCTGTTTG ATAACCGGTA TGGCACGGGT GAGTCTGTTT GGTCGGGTAT TATGCGCACT
ACCAACTTAA TTGTTGCGGG AAAAACTGTT GTTGTTATAG GTTATGGTTG GTGCGGCAAG
GGTGTTGCCA TGCGGGCCAA GGGTATGGGA GCCAAGGTTA TTGTTTGTGA GATTGATCCG
ATTAAGGCCA TTGAAGCCTT TATGGATGGG TTTCAGGTTA TGTCGGCAAA AGAGGCCTCT
GTTTCCGGGG ATATTTTCAT AACTGTAACC GGTTGCAAGG ATGTACTCAC TAAAGAGCAT
TACCAGCTGA TGAAAAACGG TGCGATTCTT TCTAACGCCG GTCATTTCGA TGTTGAGGTA
AATAAGCCCG ACCTGGAAAA GACAGCTGTA AGCCATCGTA CTGTTCGCAA GGATATTGAA
GAATACGCGA TGACAGACGG GAGAAAAATT TACTTGTTAG CGGAAGGGAG ACTTGTCAAT
TTAGCTGCCG GTGACGGTCA CCCGGCGGAA ATAATGGATA TGTCTTTTGC CCTTCAGGCT
TTGTCAGCCA GATATATTTT GAAAAATGCC GCTGCTTTAG ATAAAAAAGT GTATGATGTA
CCTAAAGAGA TTGACAGCAG GGTGGCTGAG ATAAAACTGC GTTCATTAGA TATTAATATT
GACAAATTGA CACAGGAACA AGAAGACTAT TTAAACTCCT GGTTGGTGGA ATAA
 
Protein sequence
MTDYIVRDIK LAPGGRLKID WVREHMPVLN EIRAEFEKEL PFKGIRVAIS IHLEAKTAYL 
AEVLKAGGAD VSISGSNPLS TQDDVAAALA EAGINVFSWY NSTPEEYKEH LLQVLDTKPQ
IIIDDGGDLV NLLHTERKNL VVNVLGGCEE TTTGVIRLRA LEREGGLLFP MVAVNDAYCK
YLFDNRYGTG ESVWSGIMRT TNLIVAGKTV VVIGYGWCGK GVAMRAKGMG AKVIVCEIDP
IKAIEAFMDG FQVMSAKEAS VSGDIFITVT GCKDVLTKEH YQLMKNGAIL SNAGHFDVEV
NKPDLEKTAV SHRTVRKDIE EYAMTDGRKI YLLAEGRLVN LAAGDGHPAE IMDMSFALQA
LSARYILKNA AALDKKVYDV PKEIDSRVAE IKLRSLDINI DKLTQEQEDY LNSWLVE