| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1126 |
|---|
| Symbol | |
|---|
| ID | 8428065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 1154480 |
|---|
| End bp | 1155175 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 645033461 |
|---|
| Product | transcriptional regulator, TraR/DksA family |
|---|
| Protein accession | YP_003190635 |
|---|
| Protein GI | 258514413 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1734] DnaK suppressor protein |
|---|
| TIGRFAM ID | [TIGR02420] RNA polymerase-binding protein DksA
[TIGR02890] sporulation protein, yteA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00340237 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGAC AGAAAATGCA GGCATTCAAA GAAACACTGT TGAAAGAAAA AAAAGAACTG
GAGGATTCTG TTCATTCTTT TGACGAGCGT GGTCTAGGCA TATCTCTGTC ACAAGCGACC
AGTGAATTGT CAACTTACGA CAATCACCCG GCGGATGTCG GCAGCGAGGT ATTTGAAAGG
AGTAAAGACT TTGCGTTAAG AGATGATGCC ATGTTAAAAA TCAGAGCTGT AGAGGATGCT
CTGAAAAATA TTGAGATGGG TAAATACGGG ATTTGCGACA TTTGCGGTAA AGAAATAGGT
TACGCTCGTC TGACTGCTTT GCCCCGCACC ACACTGTGCA AGGAATGCAA AGAAGCGCAG
GAAAGAATCC CTTCCCGAAA CATACGGCCG GCGGAGGAAG ACATTCTGCA GCCTCCTTTT
GAAAGAAGTT TCAATGACCG TGTCAGTGAT GACGCGGGTA TAGGCTATGA TGGTGAAGAC
GCCTGGCAGG ATGTTGCCCG GGCCTCTGAC CATGCTCCTA ACGCGCAAAG CGGTTCCTAT
TATGGCGGCG ATCAATTGCT GGACGAGGAT CGGGGCTATG TGCAGTCAGT AGAGGACATA
CCCTGCGTAA AAGGTACAGA CGGTGTGATT TACCAGGACT TTGTAGGTAC AGATGACGAG
GACTCGCCTG TTGCATTAAG AACAAAGGAT ATCTAA
|
|---|
| Protein sequence | MDRQKMQAFK ETLLKEKKEL EDSVHSFDER GLGISLSQAT SELSTYDNHP ADVGSEVFER
SKDFALRDDA MLKIRAVEDA LKNIEMGKYG ICDICGKEIG YARLTALPRT TLCKECKEAQ
ERIPSRNIRP AEEDILQPPF ERSFNDRVSD DAGIGYDGED AWQDVARASD HAPNAQSGSY
YGGDQLLDED RGYVQSVEDI PCVKGTDGVI YQDFVGTDDE DSPVALRTKD I
|
|---|
| |