Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_1053 |
Symbol | murD |
ID | 8427992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 1078283 |
End bp | 1079632 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 645033388 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_003190562 |
Protein GI | 258514340 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.625327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGG AAAACAAAAA GGTACTGGTT GTGGGAGCCG GAAAAAGCGG TCTGGCCGTT GCCCGTTTTT TAAAGACGAA AAATGCTGAG ATTGTGATAA CTGATCAGAA TTACTCTGTT GAGTTGCAAA AGCAAATTGA GCAAATTGGT GTGGTGCCTG TTCTGGGGCG ATATCCGGAG TTTTCTGATA ATGATTATGA CTTAGTTGTG GTTAGTCCCG GTGTTCCGCT CAGTGTTCAC CCGGTTGTTA AGGCTCATAG CTTGGGTATT GAGGTTATAG GTGAATTGGA ATTAGCCGCT CGTTTTATTA AAGCTCCTGT TGTGGCTATC ACCGGTACGA ATGGAAAAAC CACAACTACT TCCCTGATCG GTGAAATATT TAGAAATAAT GGTATAAAAA CATTGGTAGC CGGTAATATC GGCTTGCCTT TGGTTACTGA GGTAGAAAAA TATGGTCCTG GTGACATTAT TGTGGCTGAA GTATCCAGCT TTCAATTAGA GACTACCGTG CATTTCCGTC CTAATGTTGC TGTAATCCTC AACATTACGC CTGATCACCT TGACCGGCAT GCTACCATGC AAAACTATGC GCAGGCCAAA GCAAATATTT ATAAGCAGCA GCTGTCCTCT GATTACACTG TTCTAAATTA TGATGATTCT TTGACAGCTT CACTGGCAGT TAAAGTGCCG GGCAGGGTCA TATTTTTTAG CCGCAAACAT ATTTTAGATA GAGGGGTTTT CGTTCGTAAC GAGGAGATAA TAGCAGCGTT AGATGGCGAT GAAACAGCTA TCTGCCGGGT CGATGAAGTT AAGATACCGG GGGCTCATAA CCTGGAAAAC GCTTTGGCAT CTGTAGCTGC CGGATTTGTT TTGGGAGTTG GTCGGCAAGT ACTGGCTAAT ACTTTGAAAA CTTTTCCCGG TGTGGAACAC CGGCTGGAAT TTGTGGCGGA GATTAACGGT GTTCGCTATA TCAATGATTC CAAGGGAACC AACCCAGATG CCGCTGTCAA GGGATTGCAG GCCTATAGTC AGCCTATTGT TTTAATTGCC GGGGGCAGGA ATAAAGGCAG TGATTTTAAA GAATTTATGC AGGCAGCCAA GGAGAAGGTA AGAACAATGG TGGTGTTGGG CGAGTGTGCT CAGGAACTGC TGGAAGCGGC GCAAGCTGTT GGTTTCGGCA ATGTTATTCA GGCGACTGAT TTTATAAGTG CGGTAAAGCT GGCTGCGCAA ACTGCCCGCA GCGGTGATGT AGTGCTGCTG TCTCCTGCGT GCGCCAGTTG GGATATGTTC AAGAATTATG AGGAGAGAGG CAGGCTTTTT AAGGAGATTG TTAAGGATTT GAGGTGTTAA
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Protein sequence | MELENKKVLV VGAGKSGLAV ARFLKTKNAE IVITDQNYSV ELQKQIEQIG VVPVLGRYPE FSDNDYDLVV VSPGVPLSVH PVVKAHSLGI EVIGELELAA RFIKAPVVAI TGTNGKTTTT SLIGEIFRNN GIKTLVAGNI GLPLVTEVEK YGPGDIIVAE VSSFQLETTV HFRPNVAVIL NITPDHLDRH ATMQNYAQAK ANIYKQQLSS DYTVLNYDDS LTASLAVKVP GRVIFFSRKH ILDRGVFVRN EEIIAALDGD ETAICRVDEV KIPGAHNLEN ALASVAAGFV LGVGRQVLAN TLKTFPGVEH RLEFVAEING VRYINDSKGT NPDAAVKGLQ AYSQPIVLIA GGRNKGSDFK EFMQAAKEKV RTMVVLGECA QELLEAAQAV GFGNVIQATD FISAVKLAAQ TARSGDVVLL SPACASWDMF KNYEERGRLF KEIVKDLRC
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