| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_1051 |
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| Symbol | |
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| ID | 8427990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum acetoxidans DSM 771 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013216 |
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| Strand | + |
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| Start bp | 1075846 |
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| End bp | 1077219 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 645033386 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diamin opimelate/D-alanyl-D-alanylligase |
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| Protein accession | YP_003190560 |
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| Protein GI | 258514338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000860103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCA TGTCTTTAGA TGAGATTGCC GGGGTTATTG GAGCCAGACA AGTGCAGAAA
GGCTCAGTTA ATGAAGTTTC CTCTGTTTGC ACTGATACAC GCAGGTTAAA GCCGGGAGAA
TTGTTCTTTG CCTTAAAAGG AGAAAATTAT GATGCCAATG ATTTTGTCGA ACAAGGTAAA
GCTAAGCAAG CAGCGGCGGT TGTTGTAAGC CGGGTTTTGT CCGCTGTAAA TTCCGGTACT
GCAGTATTGC AAGTGCAGGA CAGTTTAAAA GCCCTGCAGG CTCTGGCCCG TTATAACAGG
CAGCTTTTTA ATATTCCTGT CATTGGCGTT ACCGGCAGTA ATGGTAAAAC CTCTACCAAG
GATATGATAG CAAGTGTTTT GGGTGTGCGA TATAAAACTT TAAAAACCAG CGGTAACTAC
AATAACGAAA TCGGTTTGCC TTTAACTCTG TTGTCTATGG ATAGTTCACA CCAGACAGCA
GTTGTGGAAA TGGCCATGCG AGGCAGGGGG GAAATTGATT TTCTTTGCCA ACTGGCCAGA
CCAACTGGCG CTGTAATAAC CTGTATAGGC GAAGCCCACC TGGAACTGCT TGGTTCCCGG
GAGAATATTG CTGCCGCCAA AGGCGAGATG CTTCAGCATA TTGGGCCGCA GGGGTTTGCC
TTGCTGAGCG GAAACAGTTC TTTGACCAGG CAATTGGCGG GGCTTACTGC CGGTAAGGTA
TTATTTTACG GAACAGAACC ACAGCTGGAT ATTAGAGCCT GCGATATTCA AACCGGCAGT
AATGGGAGTA AATTTACTGT AATCACATCC CGTGGGCAGG AGGATATCTT CCTTCCGATA
CCAGGTCGGC ATAATATTAT AAATTCTCTG GCAGCTGTAG GAGTGGGTCT GGAACTGGGC
CTTTCTTTGC CGGAAATCAA AGCAGGTTTG GCGGAAGTGG TTTTAACTGG TATGAGAATG
GAAATAATAA AAATTAATGG CATAACGGTG ATAAATGATG TGTATAACGC TAACCCTGAC
TCCTCTAAAG CTGCTTTGAC AACACTGGCG GATTTGGGAC ATAACCGAAG AAAGATTGCA
GTTTTAGGCA GTATGTTTGA ATTGGGCTGC AGGGCGGTAG AGGGCCATCG TGAGGTGGGC
AGAGCGGCTT TTGCAGCAGG AACCGAATAT CTGGTGACAG TGGGAGAATT GGCCCGGCAA
ATTGCTGTAG GTGCAAAAAA TGCAGGTATG CCTGCTGACA GAATATTTGT TTATGAAGAT
AAGCAGAGAG CCTGTGATTG CCTGGGTGAA TTGTGTAAAA AGGAAGATGT GATCCTGGTT
AAAGGCTCAC GGGGAATGCA TATGGAGGAA GTTGTGAGTT ATTTAGCGCA GTAA
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| Protein sequence | MKTMSLDEIA GVIGARQVQK GSVNEVSSVC TDTRRLKPGE LFFALKGENY DANDFVEQGK
AKQAAAVVVS RVLSAVNSGT AVLQVQDSLK ALQALARYNR QLFNIPVIGV TGSNGKTSTK
DMIASVLGVR YKTLKTSGNY NNEIGLPLTL LSMDSSHQTA VVEMAMRGRG EIDFLCQLAR
PTGAVITCIG EAHLELLGSR ENIAAAKGEM LQHIGPQGFA LLSGNSSLTR QLAGLTAGKV
LFYGTEPQLD IRACDIQTGS NGSKFTVITS RGQEDIFLPI PGRHNIINSL AAVGVGLELG
LSLPEIKAGL AEVVLTGMRM EIIKINGITV INDVYNANPD SSKAALTTLA DLGHNRRKIA
VLGSMFELGC RAVEGHREVG RAAFAAGTEY LVTVGELARQ IAVGAKNAGM PADRIFVYED
KQRACDCLGE LCKKEDVILV KGSRGMHMEE VVSYLAQ
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