Gene Dtox_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1028 
Symbol 
ID8427967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1049874 
End bp1051388 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content42% 
IMG OID645033363 
Productnitrogenase MoFe cofactor biosynthesis protein NifE 
Protein accessionYP_003190537 
Protein GI258514315 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTATG TTTATCCTGT TGCTCAAGCG TCAAACCGGA TACTAAAACG GGATAAACAT 
AGTGCGCCCG CTATATTAGC ACTGATATGT CTTTTAAAGA AATATGCAAG GAATAAACTT
ATTGAGAAAG TTGGGGTGGA TATGCAAGCA ATAAAACTAA CAGATGCTTT GATTGAGGAA
AGAAAAAATT CTATTACAGT TAAGGGTTCT GTGGAAGCTA AACAAAAGCA GTCTTTAACC
TGTGATGCAG AAAGCGTTGC CGGGTGTGTA AGCCAGCGTG CCTGTGTTTA CTGCGGGGCC
AGAGTTGTTT TGAACCCTGT TACGGATGCT ATTCACCTGG TGCACGGTCC GATTGGCTGT
TCTAGTTATA CCTGGGATAT CAGAGGCAGC CTGAGCAGTG CTGCTGATTT GTACCGCAAC
AGTTTTTGTA CTGATTTAAA AGAGCATGAT ATCATTTTCG GTGGTGAGAA AAAGCTTGCT
TTTGCTATTG ACGAGTTAGT TCGGAAATAT GACTCCAGGC TGGTTTTTGT ATACTCTACC
TGTGTGGTCG GTGTTATCGG TGATGATCTG GAGGCAGTCT GCAAGGCGGC GGCGGAAAAG
CATAATATTG AGGTAATCCC GGTGCAGTCA AGTGGCTTTA TTGGCAATAA ATCAGCCGGT
TACCGGGCTG CCTGTGATTC TCTGCTTCGA CTGATAGAAC CGAACTCCGG GGATGTTAAG
GATATAGTGA AAATACCAGA CAGTATTAAT TATCTAGGAG ATTTTAATCT GGCTGGTGAA
GTCTGGATTA TAAAAAGTTA TTTGGAGCAA ATTGGTGTTA AAGTTAACGT TGCTTTTACC
GGTGATTCAC ACTGCGATGC CTTGAAAAAA GCCCCTGCAG CAGCTTTGAA TATAGTGCAG
TGTGCCGGTT CCATGCGCTA CCTGGCACAA AAGATGGAAG AAATATATGA TATTCCTTGC
CTGAATATTT CATTTATAGG ATTGCAGGAC ACAGCTGATT CTCTAAGGAA AATTGCCGAC
TGGTTCAGTA ATGAAGCAAT GCTCAAGAGA GCGGAAAAAC TAATTGAGAA AAAGACAGCC
GAGGTAAAAC CTTTACTGAG AAATTACAGA AAAAAACTGG AGGGTAAAAA AGCCGCTATT
TTTGTTGGCG GTGGTTTTAA AGCAGTTTCT CTGATTAAGC AATTTAAAGA AATTGGTATA
GATGTGGTGA TGGTCGGTAC ACAGACCGGC AGCCAGGAGG AATATGAGAC TATTAATGAT
TTAGCAGATG AGGGGACGGT TATACTGGAT GATGCCAACC CTTCGGAACT GGAGAAGTTT
ATGACGGAGA AAGGTGCCGA CCTCCTGGTT GGTGGTGTTA AAGAAAGGCC TTTGGCTTAT
AAATTAGGTA TGGCCTTTAT AGATCATAAT CATGATCGCA AGCATCCATT AAGCGGTTTT
GTAGGGGCGG TTAATTTTGC TAAAGAAGTC TACTCAACTG TTTGTTCACC GGTTTGGAAA
TATGCCAAGG ACTGA
 
Protein sequence
MFYVYPVAQA SNRILKRDKH SAPAILALIC LLKKYARNKL IEKVGVDMQA IKLTDALIEE 
RKNSITVKGS VEAKQKQSLT CDAESVAGCV SQRACVYCGA RVVLNPVTDA IHLVHGPIGC
SSYTWDIRGS LSSAADLYRN SFCTDLKEHD IIFGGEKKLA FAIDELVRKY DSRLVFVYST
CVVGVIGDDL EAVCKAAAEK HNIEVIPVQS SGFIGNKSAG YRAACDSLLR LIEPNSGDVK
DIVKIPDSIN YLGDFNLAGE VWIIKSYLEQ IGVKVNVAFT GDSHCDALKK APAAALNIVQ
CAGSMRYLAQ KMEEIYDIPC LNISFIGLQD TADSLRKIAD WFSNEAMLKR AEKLIEKKTA
EVKPLLRNYR KKLEGKKAAI FVGGGFKAVS LIKQFKEIGI DVVMVGTQTG SQEEYETIND
LADEGTVILD DANPSELEKF MTEKGADLLV GGVKERPLAY KLGMAFIDHN HDRKHPLSGF
VGAVNFAKEV YSTVCSPVWK YAKD