Gene Dtox_1009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1009 
Symbol 
ID8427948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1028890 
End bp1029984 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content44% 
IMG OID645033344 
ProductPrephenate dehydrogenase 
Protein accessionYP_003190518 
Protein GI258514296 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000207637 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTAAAA AAATTGCTAT TGTCGGAGTG GGCCTGATTG GTGGTTCAAT AGGTCTGTCC 
TTAAGTAATA AACTTACTGA TGTGAAAATA ACAGGTATAG ATTTGGATAA AGAAAATCTT
AGGCTGGCCT TGGAATTAGG TGCGGTTAGC GAGACTACAG TTTCCCTGGA GGAGGGTGTT
AGAGCCGCTG AGCTGGTTAT ACTGGCAGCA CCGGTAGCTC AATCAGTTAT TTTACTTGAG
AGGATGCTGC CGTATTTATC AGCCGGGACT GTTATAACGG ATGTCGGCAG CACTAAGATG
GAAATTACTG CTAGGGCCGC AGCTTTACTG CCCGGGGATA TATATTTTGT AGGTGGTCAT
CCCATGGCTG GCTCGGAAAT TTCAGGTGTC TTGGGTGCGG ATTCCCATCT TTTTGAAAAT
GCTTATTATT TGCTTACCAT AAACGAAGAT ACTGATGTTG CTGCTCTTAG TAAAGTAAAA
TATATGGTTA GCTTGCTGGG AGCAAGAACT GTAGAACTGG CTCCCGAGGA GCATGATCAG
TCAGTTGCTG TTATTAGTCA TTTGCCGCAC CTTGTAGCTT ATACGCTGGT AAATACTTTA
GCTGCCCTGC CGGGCTGGGA GAGTATTTTG CCGTTGGCGG CGGGAGGGTT TAAAGATACT
ACCAGGATTG CTATGTCCAA CGCGGTTATG TGGCGGGACA TATTTTTGTC CAATAGAGAA
AAAGTGCTGC AGGTTTTGGC TGATTTTAAT ATGCAATTAG CTTTATTTAA GGAGGCAGTT
GAAAAATCGG ATGATAAAAA GATTATGGGA CTGATACAGG AGGCTGCTAA AGTCAGAGCA
GCTGTTCCGG CCAAGTCCAA AGGCTACTTT CCCGCACTCT ATGAAATTGT CGTTACCATA
CCGGATCGTC CCGGTATGAT TGCTGATGTG ACAGGTTATT TGGGTGAATT AGATATTAAT
ATTTCTGATA TAGAAATATT AAGGGTGCGT GAAGGGCATG AGGGTACTAT TCGCCTGGCT
TTTATTGATG AATTCCGGCA AGAGGCGGCG TTGCGGACCT TACAGGAGCA GGGTTTTCTG
GTGAGAAAAA GGTGA
 
Protein sequence
MFKKIAIVGV GLIGGSIGLS LSNKLTDVKI TGIDLDKENL RLALELGAVS ETTVSLEEGV 
RAAELVILAA PVAQSVILLE RMLPYLSAGT VITDVGSTKM EITARAAALL PGDIYFVGGH
PMAGSEISGV LGADSHLFEN AYYLLTINED TDVAALSKVK YMVSLLGART VELAPEEHDQ
SVAVISHLPH LVAYTLVNTL AALPGWESIL PLAAGGFKDT TRIAMSNAVM WRDIFLSNRE
KVLQVLADFN MQLALFKEAV EKSDDKKIMG LIQEAAKVRA AVPAKSKGYF PALYEIVVTI
PDRPGMIADV TGYLGELDIN ISDIEILRVR EGHEGTIRLA FIDEFRQEAA LRTLQEQGFL
VRKR