| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0945 |
|---|
| Symbol | |
|---|
| ID | 8427884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | + |
|---|
| Start bp | 965732 |
|---|
| End bp | 967093 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645033285 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003190459 |
|---|
| Protein GI | 258514237 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00793831 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0982171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCAAA TCGATCCTCG TCTTCATCTG TTTGAGGTTG ATGGCTCCAA TTACGCGGTC
AGCACGGAAT ACATGCGGTT TGCCGGGATC GATCCGGAGA CGGCGGCGGT GGTAAGGCTG
GGCGGGCCGG CTGAACCGGT CCTGAGCCGG CTGGGGGTCC CGCTGGAACC TTGCGGACGG
AAGCGGTTCC TGTTTGCGCC GCCGGACACT CTGGTATTGA TGCTGACCTA TGCCTGCAAC
ATGGCCTGCC GGTATTGCTG CCAGGGAGAA ATTCCTGATA TCCGGGAAAA CCAGATGTCC
GAGGCAGTGT CGTGCCGGTC TGTCGACTGG CTGATCCGGA ACTCGGCAGG TTCGAAAACG
GTTAATATCG GATTTTTTGG CGGTGAGCCC TTGCTTAAAT TTTCGCTGAT GCAAAAAATT
GCCGTCTACG CCGAACGGCA AGCGGCAGCC GCCGACAAGC GGGTGCGCTA CGGCATCATG
ACCAACGGCC TGCTGCTGAC CGACCCTGTC ATTGATTTTC TAGCTGAGCG GCAAGTCGAG
GTTACCGTCA GTTTTGACGG GCCGCCTGCC GTACAAGACC GCAACCGGCC GCTGAAAGGC
GGCGGGGGCT CTTTCCATCT TATTGCTGAA AAAATCCGGA AACTGCTGGC GCGCTGCCCG
GACGCCACGC TCCGCCCCAC ACTCTATGCC GGCGCCGATC TTGACGAGGT GCTTCAAACA
GCCCGGCAGC TAGGTTTCCG GCAGTGCCGC ATTGAAAAAG TGTCCAGTTC GTTATTGCCG
GAAGGGAAAA AAAATGACGA AGCGGCATCT TCCGGCCAGT TGGCGGCCCA TTTGCGCCGC
CAGGGCGAAC GTTTTCTAAC CGCTGTCCGG GACCGGGATG CGGCCGGATT GCGGCGGATC
GCCGTGGATG GCGCGTTCAT GGAGGGATTA AGGCAAATGT TCCATGCGGA CTGGGCAGGC
ACGGTCCGGC GGCGTTGGTT TTCCTGCGGC ACCGGCAGGC AGCTGTTGGC GGTGGCGGTT
AACGGCGATT TGTATCCATG CCCGCGCTTC CTGGCCTTGC CGGAATACAG GGTGGGTTCG
GTTGCTGAGG ACGGTTTCCA GGGAGAACTG CACCAAAAAA GCCTTTTGAT CCACAGCGAG
GATTGCCGGT CCTGTTGGGC GCGTTATTTC TGCGGCGGCG CCTGCATTGT GGAACACTTG
GGTGGTACCG GTTCAATTTT CCGGGTCAAC CCGAACACTT GCCGCCTGCG GCGGGCCAGA
ATCGAAACAG CCGTCCGGGT GATTGCCGAA TGCTCAGACG AGGATAAAGC GTTCTTGCAG
GAGACCGGCG TTTTGCCGGG CCGGCTGGCG GTAAAAGCGT GA
|
|---|
| Protein sequence | MGQIDPRLHL FEVDGSNYAV STEYMRFAGI DPETAAVVRL GGPAEPVLSR LGVPLEPCGR
KRFLFAPPDT LVLMLTYACN MACRYCCQGE IPDIRENQMS EAVSCRSVDW LIRNSAGSKT
VNIGFFGGEP LLKFSLMQKI AVYAERQAAA ADKRVRYGIM TNGLLLTDPV IDFLAERQVE
VTVSFDGPPA VQDRNRPLKG GGGSFHLIAE KIRKLLARCP DATLRPTLYA GADLDEVLQT
ARQLGFRQCR IEKVSSSLLP EGKKNDEAAS SGQLAAHLRR QGERFLTAVR DRDAAGLRRI
AVDGAFMEGL RQMFHADWAG TVRRRWFSCG TGRQLLAVAV NGDLYPCPRF LALPEYRVGS
VAEDGFQGEL HQKSLLIHSE DCRSCWARYF CGGACIVEHL GGTGSIFRVN PNTCRLRRAR
IETAVRVIAE CSDEDKAFLQ ETGVLPGRLA VKA
|
|---|
| |