Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtox_0917 |
Symbol | |
ID | 8427856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum acetoxidans DSM 771 |
Kingdom | Bacteria |
Replicon accession | NC_013216 |
Strand | + |
Start bp | 927992 |
End bp | 930226 |
Gene Length | 2235 bp |
Protein Length | 744 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 645033260 |
Product | CRISPR-associated helicase Cas3 |
Protein accession | YP_003190434 |
Protein GI | 258514212 |
COG category | [R] General function prediction only |
COG ID | [COG1203] Predicted helicases |
TIGRFAM ID | [TIGR01587] CRISPR-associated helicase Cas3 [TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000123408 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGATGAAA ATGCATTAGC AAAATCAGCA CCTAAGGAGG ATATACAAAC CCATACAGAC AACCTGTTAA AGAATGTGAA TTTATTAAAA GAATTATACC CCAATCTAAA AGTAGATTGG GGTCTGCTGC ATTGGGCTTG TGTCTATCAC GATTTAGGTA AGCTGCATTT TAAATTTCAG GATCGTATTA AAGGGATTAA ACATCACCCG GGTGAAATAC CCCATGGTCT TTTGAGCCTG GCCATGATTG ATCACAAAGC TCTCAAGAAT ATGGGGTATG ACAGAAATGC GATTAAACTT TTATATCAAG CTGTTGCCTA TCATCACGAC CGGAAAATGC CATTCCAAAA TGAAGAGATT GAAAAAGAGT TTGCAGGCTT GTATCCTAAT TTTGCAAGCT TTGAATATGA TAAGCTTCCA GAAAAATTGA AGATAGCGAC TGAAATTAAC CAGCGTTATT TTAGTGTAAA CAAGAGATTT TATGAGGAAC GTGACAAAGA TCTGTTTTTT GAATTCATTA TGCTGGAGGG ACTGCTTAAC CGCATGGATT ATGCCGCCAG TGCAGGTATT CCGGTGGAGA CTCCAAACGA TTTCTTATCT GCTTCAATGG ATGAGTTAAT GTGTAGTTGG CAAGAAGTGG ACGAGAATAC CAATTGGAAT GATTTGCAGA TATATATGAG AAACAAGCCT GACAAAAACC TCATTGTAAT TGCACAAACC GGTATGGGTA AAACAGAAGC GGGACTTTTA TGGCTAGGCA ACGCCAAGGG CTTTTTCACT TTGCCCCTTA AAAGTGCTAT CAATGCTATT TACAAGCGGA TATCAGAAAA AATAGTTCGT GAGAAAATGG ATGAGAGGGT GGGGTTGCTT CATTCGGATA CTTATATCAA ATATCTTGAA CAAGGAGAAA AGGATGAGAG TATATCCCTT GATACCTATT ATACAAAAAC AAGACAGTTG TCCCTGCCCT TGACCATCTG TACCTTAGAC CAGCTATTTA ATTTTGTTTT TCGCTACAGG GGTTTTGAGC AGAAACTGGC GACATTATCT TATTCCAAGG TTATCATTGA TGAAGTGCAG ATGTATTCTC CCGAATTAAT AGCCTATCTT GTGCTCGGAT TGCACTATAT CACCCGTATG GAGGGGAAAT TTGCCATTTT GACAGCAACA TTGCCGACTT TATTTTTAGA CCTGCTGCGG GAACAGGATA TTATATTTGA ACCGGCCCAA ATATTCACAA ATGATATAAT CCGCCATAGT CTAAAGGTAC TGGACGAGGA TATTAACTCT AAGGATATTG TGGATATTAG TAAGCAATAT GGCGGTAAGA AAATTCTTGT TATCTGCAAC ACTATTAAAA GTGCGCTTAA ATTATATCAT CAACTTGCTC AAGTGGCGGG TAAGCAGCAG GTTTGGCTCC TGCATAGTCA CTTTACAAAA GAAGATCGAT CTATCAAAGA AAGTCATATA ATGGAAATGG GGAAAAGGGA AAATACTCAG TGCGGTATTT GGGTTGCTAC ACAAATTGTA GAGGCATCTC TGGATATTGA TTTTGATCTG TTGTTTACTG AACTATCCGA CCTAAACGGC TTATTCCAAC GTATGGGAAG GTGTTATAGA AATAGGATTT TAGACATGGA ATATAACTGC TTTGTATTTA CCGGTGGCAA TAAACGATGC AGCGGTGTGG GAGCGTTTAT TGATAAAAAA GTTCATAATT GTTCAAAGGA GTCCCTTGTA GGTATTGATG GAATTATTAC TGAAGGGCAA AAAATTGCTA TGGTTGAGGA ACTTTACACA AAGGAAAAAC TGTCTGATTA TTATCGTAAC ATTAAAGAAA ATATTGATTA TGTAAAAAGC ATTAATGAAT ATGAGTTTAG CAAAACAGAT GTAAATAACA AGTTTCGCAG TATTGATACG GTAAGTGTTA TCCCACGTGG CGTTTATAAT AAGTATCCAG TAGAAATCAA TGAGGCTATA AATATACTGA AAGCAGATTA TAGTGGCGTT GATAAAAGTG AAGCGAGGGT GCACAGGGCA AGTGCAAGAC GTATTATCGC TGAGCAAACC GTAGATATCC CCTTTTATTT GGCTCAAAAA ATAATACTTA AAAAAATATA TATTAACGCA TATGAACAAT TGTCTATTGC TGAGTGCGAA TATAACAGTC AGGAGGGAAT TATTAAGCCG GACATGAAGA CAGGGGGCGA AGACTTTTCA TCACATTCGT TTTAA
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Protein sequence | MDENALAKSA PKEDIQTHTD NLLKNVNLLK ELYPNLKVDW GLLHWACVYH DLGKLHFKFQ DRIKGIKHHP GEIPHGLLSL AMIDHKALKN MGYDRNAIKL LYQAVAYHHD RKMPFQNEEI EKEFAGLYPN FASFEYDKLP EKLKIATEIN QRYFSVNKRF YEERDKDLFF EFIMLEGLLN RMDYAASAGI PVETPNDFLS ASMDELMCSW QEVDENTNWN DLQIYMRNKP DKNLIVIAQT GMGKTEAGLL WLGNAKGFFT LPLKSAINAI YKRISEKIVR EKMDERVGLL HSDTYIKYLE QGEKDESISL DTYYTKTRQL SLPLTICTLD QLFNFVFRYR GFEQKLATLS YSKVIIDEVQ MYSPELIAYL VLGLHYITRM EGKFAILTAT LPTLFLDLLR EQDIIFEPAQ IFTNDIIRHS LKVLDEDINS KDIVDISKQY GGKKILVICN TIKSALKLYH QLAQVAGKQQ VWLLHSHFTK EDRSIKESHI MEMGKRENTQ CGIWVATQIV EASLDIDFDL LFTELSDLNG LFQRMGRCYR NRILDMEYNC FVFTGGNKRC SGVGAFIDKK VHNCSKESLV GIDGIITEGQ KIAMVEELYT KEKLSDYYRN IKENIDYVKS INEYEFSKTD VNNKFRSIDT VSVIPRGVYN KYPVEINEAI NILKADYSGV DKSEARVHRA SARRIIAEQT VDIPFYLAQK IILKKIYINA YEQLSIAECE YNSQEGIIKP DMKTGGEDFS SHSF
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