Gene Dtox_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0905 
Symbol 
ID8427844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp915946 
End bp917106 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content48% 
IMG OID645033248 
ProductPrephenate dehydratase 
Protein accessionYP_003190422 
Protein GI258514200 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000067938 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000600467 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGTGAAA TAAAGACAGC TAACAATATC AATAAGATTG CTTATCTCGG TCCCATTGGT 
ACCTTTTGCG AAGAAGCCGC CTGCAAGTTT ACTATGCGGG AGCAAGTTGA CTGGCAATTA
CTTCCTTGCG GCACTATTGT GGATGTATTC AATTCCGTTT ACCGGGGAGA GGTGGATTTA
GGCATAGTGC CAATTGAGAA TTCCTGTGAA GGCTCGGTAA ACCAGACTCT TGATCTGCTG
GCTAACGAAT TCGACTTGAA GATAACCGGG GAGATTATAC TGCCGGTGCA GCAGAATTTA
ATAAGCAGGC AGGGCGTGGA GCTAACGGCT ATTACCCGTG TTCTCTCTCA TCCCCAGGCA
CTGGCTCAAT GCCGGGAATA TCTTGAAGGT CACTTGCCGG GGGCTGAACC GGTTGAGATT
GCCAGTACGG CGGAAGCAGC CAGGCAGGTG GCTTTGAGCG GGGAGGTCTG GGCTGCTATA
GGCACAGCCG GAGCAGCCGC GGCTTACGGG CTAGCTGTAC TGGTGCCGGC AATTAATGAT
TATTCCAATA ATGAAACCAG GTTTGTGCTG CTTTCCCGGT TTGACAGCGA TTGTTTTTGG
GATTGTAAAA CTTCACTGCT GGTTTATGTA TTGAACCAAC CAGGCGCGCT GTCCCGCGTA
TTGGGGGAGT TTTCTTTAAG GGGAATTAAC CTGACCAAGA TAGAATCACG CCCGACCCGC
AAAAAAATAG GTGAGTATTT CTTTTTTATA GACATAGAGG GCCACAGGCT GGAACCCAAA
GTAAAAGAGG CGCTGGAGGA AATAAGGACA GTAGCGCAGG CAGTCAGGGT ACTGGGTACT
TACAGATCGG CTGTCAAAGT TGAGACGGCT AAAAGAAGTG TCTTTGAACC GACGCTGGAC
GATTTAAGGC AGGAGATAGA TATGATCGAT GACCAAATCA TAGAACTGCT GGGACGTCGT
ACCCGTACGG TGGATAAGGT TGGCAATTTT AAGAAGGTGG GCAGTGTGCG TGATCCCGAA
AGAGAGAGCC GCGTATTGGA AAAACTGAGA AAACTGGCTG AGATAAAGGG CTTTGATCCT
GATGTTATAT CAAAGGTCTA TAGAATATTA TTTGACCATT TCGTTAGTTT GCAACAGAAG
AAGGTTGATT CAGGGCAATA A
 
Protein sequence
MCEIKTANNI NKIAYLGPIG TFCEEAACKF TMREQVDWQL LPCGTIVDVF NSVYRGEVDL 
GIVPIENSCE GSVNQTLDLL ANEFDLKITG EIILPVQQNL ISRQGVELTA ITRVLSHPQA
LAQCREYLEG HLPGAEPVEI ASTAEAARQV ALSGEVWAAI GTAGAAAAYG LAVLVPAIND
YSNNETRFVL LSRFDSDCFW DCKTSLLVYV LNQPGALSRV LGEFSLRGIN LTKIESRPTR
KKIGEYFFFI DIEGHRLEPK VKEALEEIRT VAQAVRVLGT YRSAVKVETA KRSVFEPTLD
DLRQEIDMID DQIIELLGRR TRTVDKVGNF KKVGSVRDPE RESRVLEKLR KLAEIKGFDP
DVISKVYRIL FDHFVSLQQK KVDSGQ