Gene Dtox_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_0859 
Symbol 
ID8427798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp868962 
End bp869438 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content39% 
IMG OID645033211 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003190385 
Protein GI258514163 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.632805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGACT TCGAAGAAAT ATATACAAAA TATTTTTCTG ATGTATATAA ATATGTGCTA 
ACCCTATGCC GGAACGAGGC TATCGCGGAA GAGGTTACGC AGGAAACTTT TTTCAAAGCC
ATGCGGCATA TAGATCAGTT CAATGGAAGC TGCAAATTAT ACGTATGGCT TTATCAGATT
GCTAAAAATA CTTACTTCTC ACTTTCCAAA AAACGAAAGC GTATCGCTCT GGATATAGAT
GCAGATTTCC CGGATATAAC ATCAGACATA GAAAGAGATT ACTTTAATAA AGAAGCGGCA
ACGCGGTTAC ACATTCTGCT TCATAATCTG AATGAGCCAT ACAAAGAGGT CTTTACTTTG
CGGGTATTCG GAGAACTGCC ATTTTCTCAA ATCGGTGAGT TATTCGGGAA AACCGATAGT
TGGGCAAGGC TGATTTTTTA CAGGGCAAAA AAACAATTAC AGGAGGCAAT GAAATGA
 
Protein sequence
MTDFEEIYTK YFSDVYKYVL TLCRNEAIAE EVTQETFFKA MRHIDQFNGS CKLYVWLYQI 
AKNTYFSLSK KRKRIALDID ADFPDITSDI ERDYFNKEAA TRLHILLHNL NEPYKEVFTL
RVFGELPFSQ IGELFGKTDS WARLIFYRAK KQLQEAMK