| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtox_0838 |
|---|
| Symbol | |
|---|
| ID | 8427777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum acetoxidans DSM 771 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013216 |
|---|
| Strand | - |
|---|
| Start bp | 856032 |
|---|
| End bp | 857714 |
|---|
| Gene Length | 1683 bp |
|---|
| Protein Length | 560 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 645033192 |
|---|
| Product | transposase (IS4 family protein) |
|---|
| Protein accession | YP_003190366 |
|---|
| Protein GI | 258514144 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5421] Transposase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAACC AAATACTACA AAATATTAAT AGCTTACAGG TGGGGCCCAG CGCAATAATA
GCTGCACTTA CCCGAGAAAT AAATTTAGTA CAAATCATTA ACAATCAGGT AATCTGGGAT
GAAAAACAAT GTAATAATTC ACCAGGCCTT TATGTAGAAG CTATGATTAT AAACATATTG
ACAGACCGAA AACCTTTGTA CCGAGTATCT GAATTTTTTA AAGATATGGA CGTAGAAGCA
TTATTTGGTC CAACGGTACA AGCAACTGAT TTCAACGACG ATGCTTTAGG AAATACATTG
GATCGATTAG CTGAATCAAA TCTAGACCAT TTGTATTCTA ACATAGTTTT ACAAGCACAT
TTAAAACACC GTTTTAGAGT AGATTTAGCA CATGGTGATA CTACATCCAT TACTGTTTAT
GGAGATTATG CCAATGCTTC GTCGGAGACA TTAAACATAG TTCGAGGATT TAACAAAGAC
GGCCATCGGG ACTGCAAGCA GATAGTAGCT GGTGCAGTAG TAACTCCCGA AGGAATACCT
CTTATGGGAA CAATAAACGA TGGCAACTTA AACGATGTGA AATGGAATCA ACAAATAATC
GAACAATTGC CGGAAATGTT AAAATCACTT AATAGTCCAG AAACCATATA CGTAGCTGAC
TCAAAACTGG TTACCATAGA TAACCTAAAA CATTTAGCCA AGAAAAACAT TCGCTTCATA
TCCCGAATTC CTGAGACATT TGGAATAGTA CCGTCACTTA AAGATTGGGC CTTTCGCCAA
GATAAGTGGC AAGAAATAGA GAATATATTG CCGGATAAAA ACGCTGCTGT ATATAAGCTT
CAGTCCATAA AAGTGAAATT GGGCGACCGT CGTTACCGGT TTATTATCGT ACATTCATCA
AATCTTGATC AAAAGAAAGA AAAAACATTG AAGCGTACTG CTGAGAATGA ACAGAAAAAA
CTAGAAAAAA TCTGTAAAGA AATTGGTAAA CAAGAATTTG CTTGCGAAAA AGATGCCATC
TCGTACTTAA GACATATGAA AAAGAAACAG GACGGACAGT TCTACCATTT AGATGCAGAA
GTAATTGCTG AAGAAAAAAA AGGTGTAGGG CGCCCCAAAA CAAAAGAAAA GTCCCCCATA
AAAATAGTTT ATCGCATAAA GGCTATAGTT AGTGTAATGG ATGAAACGGC CTGGCAAATG
GCAAAAGAAA GGGCATCAAC ATTTGTACTG ATCACCAATT TAAAAAATCC AAGGGAAAAT
ACAGCAGAAA CAATCCTTCG GCATTACAAA GAACAAAACA CAGTGGAAAT GCGCTTTCGC
TTTCTAAAAA ACCCCGCAAT ATTAGGTCAA GTCTTTTTGA AAAAGCCGTC AAGAGTAAAA
GCACTTGGAT ATATATTCTT GATAACCATG TTAATTTATG CACTTATGGA ACGTAGAGTT
AGACAAAATC TAGCCGCAGA AGGGAAAGTC CTTCAATTAA GCTATCGTTC AAAAGTTAAA
CAACCAACAG GAATGTTGAT TTTGCAAGAG ATGACGAACT TTACAATAAT TCATATTACC
CGTAAATTAG GAAGAAGAGA GAGGTATCTA CCAACCAAAA CAAGCAAACA ACAATTAGAA
ATAATCCGAT TGACAGGATT TGATGAGTCG ATATACCTAA AAGAATTATC TATAGTATCA
TAA
|
|---|
| Protein sequence | MENQILQNIN SLQVGPSAII AALTREINLV QIINNQVIWD EKQCNNSPGL YVEAMIINIL
TDRKPLYRVS EFFKDMDVEA LFGPTVQATD FNDDALGNTL DRLAESNLDH LYSNIVLQAH
LKHRFRVDLA HGDTTSITVY GDYANASSET LNIVRGFNKD GHRDCKQIVA GAVVTPEGIP
LMGTINDGNL NDVKWNQQII EQLPEMLKSL NSPETIYVAD SKLVTIDNLK HLAKKNIRFI
SRIPETFGIV PSLKDWAFRQ DKWQEIENIL PDKNAAVYKL QSIKVKLGDR RYRFIIVHSS
NLDQKKEKTL KRTAENEQKK LEKICKEIGK QEFACEKDAI SYLRHMKKKQ DGQFYHLDAE
VIAEEKKGVG RPKTKEKSPI KIVYRIKAIV SVMDETAWQM AKERASTFVL ITNLKNPREN
TAETILRHYK EQNTVEMRFR FLKNPAILGQ VFLKKPSRVK ALGYIFLITM LIYALMERRV
RQNLAAEGKV LQLSYRSKVK QPTGMLILQE MTNFTIIHIT RKLGRRERYL PTKTSKQQLE
IIRLTGFDES IYLKELSIVS
|
|---|
| |